Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 AC156016.3-201ENSMUST00000228623 344 ntBASIC15.13■□□□□ 0.01
Vti1aO89116 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vti1aO89116 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vti1aO89116 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vti1aO89116 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vti1aO89116 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vti1aO89116 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vti1aO89116 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vti1aO89116 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vti1aO89116 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Vti1aO89116 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vti1aO89116 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vti1aO89116 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vti1aO89116 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vti1aO89116 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vti1aO89116 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vti1aO89116 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vti1aO89116 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Vti1aO89116 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vti1aO89116 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vti1aO89116 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vti1aO89116 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vti1aO89116 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Vti1aO89116 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vti1aO89116 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC15.12■□□□□ 0.01
Vti1aO89116 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vti1aO89116 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vti1aO89116 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vti1aO89116 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Vti1aO89116 Gm12585-201ENSMUST00000117307 290 ntBASIC15.12■□□□□ 0.01
Vti1aO89116 Gm11918-201ENSMUST00000121660 179 ntBASIC15.12■□□□□ 0.01
Vti1aO89116 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vti1aO89116 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC15.12■□□□□ 0.01
Vti1aO89116 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC15.12■□□□□ 0.01
Vti1aO89116 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vti1aO89116 Ighv1-25-201ENSMUST00000195638 345 ntBASIC15.12■□□□□ 0.01
Vti1aO89116 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Vti1aO89116 Gm45668-201ENSMUST00000211271 493 ntBASIC15.12■□□□□ 0.01
Vti1aO89116 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vti1aO89116 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Vti1aO89116 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vti1aO89116 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vti1aO89116 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vti1aO89116 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vti1aO89116 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Vti1aO89116 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vti1aO89116 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vti1aO89116 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Vti1aO89116 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vti1aO89116 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC15.11■□□□□ 0.01
Vti1aO89116 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vti1aO89116 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Vti1aO89116 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vti1aO89116 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vti1aO89116 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vti1aO89116 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vti1aO89116 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vti1aO89116 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vti1aO89116 Gm7820-201ENSMUST00000121012 1052 ntBASIC15.11■□□□□ 0.01
Vti1aO89116 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vti1aO89116 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vti1aO89116 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC15.11■□□□□ 0.01
Vti1aO89116 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC15.11■□□□□ 0.01
Vti1aO89116 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC15.11■□□□□ 0.01
Vti1aO89116 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vti1aO89116 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vti1aO89116 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vti1aO89116 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vti1aO89116 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vti1aO89116 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vti1aO89116 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Vti1aO89116 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vti1aO89116 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Vti1aO89116 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.11■□□□□ 0.01
Vti1aO89116 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC15.11■□□□□ 0.01
Vti1aO89116 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vti1aO89116 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.11■□□□□ 0.01
Vti1aO89116 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vti1aO89116 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vti1aO89116 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vti1aO89116 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Vti1aO89116 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vti1aO89116 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Vti1aO89116 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vti1aO89116 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vti1aO89116 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Vti1aO89116 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Vti1aO89116 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC15.1■□□□□ 0.01
Vti1aO89116 Gm21854-201ENSMUST00000179901 471 ntBASIC15.1■□□□□ 0.01
Vti1aO89116 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vti1aO89116 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vti1aO89116 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vti1aO89116 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC15.1■□□□□ 0.01
Vti1aO89116 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vti1aO89116 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vti1aO89116 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vti1aO89116 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vti1aO89116 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vti1aO89116 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vti1aO89116 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms