Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ubr1O70481 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ubr1O70481 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ubr1O70481 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ubr1O70481 Gm6023-201ENSMUST00000118217 606 ntBASIC17.86■□□□□ 0.45
Ubr1O70481 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ubr1O70481 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC17.86■□□□□ 0.45
Ubr1O70481 AC154462.2-201ENSMUST00000227519 370 ntBASIC17.86■□□□□ 0.45
Ubr1O70481 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ubr1O70481 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ubr1O70481 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ubr1O70481 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ubr1O70481 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Ubr1O70481 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ubr1O70481 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Ubr1O70481 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ubr1O70481 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
Ubr1O70481 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ubr1O70481 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ubr1O70481 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ubr1O70481 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC17.85■□□□□ 0.45
Ubr1O70481 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ubr1O70481 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ubr1O70481 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ubr1O70481 Gm12846-201ENSMUST00000120431 1373 ntBASIC17.85■□□□□ 0.45
Ubr1O70481 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC17.85■□□□□ 0.45
Ubr1O70481 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ubr1O70481 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ubr1O70481 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ubr1O70481 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC17.85■□□□□ 0.45
Ubr1O70481 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ubr1O70481 Gm38158-201ENSMUST00000194617 339 ntBASIC17.85■□□□□ 0.45
Ubr1O70481 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ubr1O70481 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC17.85■□□□□ 0.45
Ubr1O70481 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Ubr1O70481 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Ubr1O70481 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Ubr1O70481 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC17.85■□□□□ 0.45
Ubr1O70481 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ubr1O70481 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Ubr1O70481 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ubr1O70481 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ubr1O70481 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ubr1O70481 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ubr1O70481 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ubr1O70481 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ubr1O70481 Gm9431-201ENSMUST00000119765 1051 ntBASIC17.84■□□□□ 0.45
Ubr1O70481 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC17.84■□□□□ 0.45
Ubr1O70481 Gm6222-202ENSMUST00000182143 629 ntBASIC17.84■□□□□ 0.45
Ubr1O70481 Gm27501-201ENSMUST00000183599 107 ntBASIC17.84■□□□□ 0.45
Ubr1O70481 Gm29396-201ENSMUST00000185659 716 ntBASIC17.84■□□□□ 0.45
Ubr1O70481 Gm5896-201ENSMUST00000189662 1024 ntBASIC17.84■□□□□ 0.45
Ubr1O70481 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ubr1O70481 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC17.84■□□□□ 0.45
Ubr1O70481 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC17.84■□□□□ 0.45
Ubr1O70481 AC154171.1-201ENSMUST00000224610 643 ntBASIC17.84■□□□□ 0.45
Ubr1O70481 Gm17383-201ENSMUST00000078739 1041 ntBASIC17.84■□□□□ 0.45
Ubr1O70481 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ubr1O70481 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ubr1O70481 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Ubr1O70481 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ubr1O70481 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ubr1O70481 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ubr1O70481 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC17.84■□□□□ 0.45
Ubr1O70481 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC17.84■□□□□ 0.45
Ubr1O70481 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC17.84■□□□□ 0.45
Ubr1O70481 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC17.84■□□□□ 0.45
Ubr1O70481 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC17.84■□□□□ 0.45
Ubr1O70481 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ubr1O70481 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Ubr1O70481 Gm16372-201ENSMUST00000073088 450 ntBASIC17.84■□□□□ 0.45
Ubr1O70481 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Ubr1O70481 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ubr1O70481 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Ubr1O70481 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.83■□□□□ 0.45
Ubr1O70481 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Ubr1O70481 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.45
Ubr1O70481 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Ubr1O70481 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ubr1O70481 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.45
Ubr1O70481 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ubr1O70481 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Ubr1O70481 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Ubr1O70481 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ubr1O70481 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ubr1O70481 Gm11978-201ENSMUST00000122315 466 ntBASIC17.83■□□□□ 0.44
Ubr1O70481 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC17.83■□□□□ 0.44
Ubr1O70481 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ubr1O70481 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC17.83■□□□□ 0.44
Ubr1O70481 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC17.83■□□□□ 0.44
Ubr1O70481 Gm38341-201ENSMUST00000195357 515 ntBASIC17.83■□□□□ 0.44
Ubr1O70481 Gm37008-201ENSMUST00000195712 319 ntBASIC17.83■□□□□ 0.44
Ubr1O70481 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ubr1O70481 Gm45880-201ENSMUST00000213041 853 ntBASIC17.83■□□□□ 0.44
Ubr1O70481 AC096628.2-201ENSMUST00000225443 1413 ntBASIC17.83■□□□□ 0.44
Ubr1O70481 CT485787.1-201ENSMUST00000225617 968 ntBASIC17.83■□□□□ 0.44
Ubr1O70481 CT009713.10-202ENSMUST00000225734 696 ntBASIC17.83■□□□□ 0.44
Ubr1O70481 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ubr1O70481 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ubr1O70481 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms