Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Gm29741-201ENSMUST00000192667 421 ntBASIC13.86□□□□□ -0.19
Pdlim1O70400 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.86□□□□□ -0.19
Pdlim1O70400 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.86□□□□□ -0.19
Pdlim1O70400 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Pdlim1O70400 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Pdlim1O70400 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pdlim1O70400 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pdlim1O70400 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.86□□□□□ -0.19
Pdlim1O70400 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pdlim1O70400 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pdlim1O70400 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pdlim1O70400 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pdlim1O70400 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pdlim1O70400 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim1O70400 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim1O70400 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim1O70400 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim1O70400 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.85□□□□□ -0.19
Pdlim1O70400 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim1O70400 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim1O70400 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim1O70400 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim1O70400 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim1O70400 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim1O70400 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim1O70400 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.85□□□□□ -0.19
Pdlim1O70400 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim1O70400 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Pdlim1O70400 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim1O70400 Gm10576-201ENSMUST00000191927 825 ntBASIC13.85□□□□□ -0.19
Pdlim1O70400 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.85□□□□□ -0.19
Pdlim1O70400 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.85□□□□□ -0.19
Pdlim1O70400 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.85□□□□□ -0.19
Pdlim1O70400 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.85□□□□□ -0.19
Pdlim1O70400 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.85□□□□□ -0.19
Pdlim1O70400 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Pdlim1O70400 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim1O70400 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim1O70400 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim1O70400 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim1O70400 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim1O70400 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.85□□□□□ -0.19
Pdlim1O70400 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim1O70400 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim1O70400 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Pdlim1O70400 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.85□□□□□ -0.19
Pdlim1O70400 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Pdlim1O70400 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim1O70400 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim1O70400 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Pdlim1O70400 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim1O70400 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim1O70400 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim1O70400 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pdlim1O70400 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pdlim1O70400 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pdlim1O70400 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Pdlim1O70400 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pdlim1O70400 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.84□□□□□ -0.19
Pdlim1O70400 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pdlim1O70400 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pdlim1O70400 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pdlim1O70400 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pdlim1O70400 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pdlim1O70400 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pdlim1O70400 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pdlim1O70400 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.84□□□□□ -0.19
Pdlim1O70400 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pdlim1O70400 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pdlim1O70400 Gm14719-201ENSMUST00000121891 340 ntBASIC13.84□□□□□ -0.19
Pdlim1O70400 Gm15487-201ENSMUST00000122373 465 ntBASIC13.84□□□□□ -0.19
Pdlim1O70400 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pdlim1O70400 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Pdlim1O70400 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Pdlim1O70400 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.84□□□□□ -0.19
Pdlim1O70400 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pdlim1O70400 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.84□□□□□ -0.19
Pdlim1O70400 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pdlim1O70400 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pdlim1O70400 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pdlim1O70400 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pdlim1O70400 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pdlim1O70400 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pdlim1O70400 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.84□□□□□ -0.19
Pdlim1O70400 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pdlim1O70400 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Pdlim1O70400 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pdlim1O70400 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pdlim1O70400 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pdlim1O70400 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Pdlim1O70400 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pdlim1O70400 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pdlim1O70400 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pdlim1O70400 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pdlim1O70400 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.83□□□□□ -0.2
Pdlim1O70400 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Pdlim1O70400 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.83□□□□□ -0.2
Pdlim1O70400 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pdlim1O70400 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.83□□□□□ -0.2
Pdlim1O70400 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms