Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp8O70138 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp8O70138 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp8O70138 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp8O70138 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp8O70138 Gm45605-201ENSMUST00000210265 4269 ntBASIC17.08■□□□□ 0.32
Mmp8O70138 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Mmp8O70138 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp8O70138 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp8O70138 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp8O70138 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp8O70138 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp8O70138 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp8O70138 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp8O70138 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp8O70138 AC168058.1-201ENSMUST00000219521 2282 ntBASIC17.07■□□□□ 0.32
Mmp8O70138 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp8O70138 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp8O70138 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp8O70138 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC17.07■□□□□ 0.32
Mmp8O70138 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp8O70138 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp8O70138 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC17.07■□□□□ 0.32
Mmp8O70138 AC166997.1-201ENSMUST00000225122 572 ntBASIC17.07■□□□□ 0.32
Mmp8O70138 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC17.07■□□□□ 0.32
Mmp8O70138 Gm8337-201ENSMUST00000187358 1938 ntBASIC17.07■□□□□ 0.32
Mmp8O70138 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp8O70138 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp8O70138 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp8O70138 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp8O70138 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Mmp8O70138 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp8O70138 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.06■□□□□ 0.32
Mmp8O70138 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Mmp8O70138 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp8O70138 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp8O70138 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC17.06■□□□□ 0.32
Mmp8O70138 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp8O70138 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Mmp8O70138 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp8O70138 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp8O70138 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp8O70138 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC17.06■□□□□ 0.32
Mmp8O70138 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp8O70138 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp8O70138 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp8O70138 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp8O70138 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Mmp8O70138 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp8O70138 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC17.05■□□□□ 0.32
Mmp8O70138 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp8O70138 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp8O70138 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp8O70138 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp8O70138 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp8O70138 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC17.05■□□□□ 0.32
Mmp8O70138 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp8O70138 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC17.05■□□□□ 0.32
Mmp8O70138 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp8O70138 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Mmp8O70138 AC125206.2-201ENSMUST00000217454 574 ntBASIC17.05■□□□□ 0.32
Mmp8O70138 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp8O70138 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp8O70138 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Mmp8O70138 Gm42872-201ENSMUST00000200026 1967 ntBASIC17.05■□□□□ 0.32
Mmp8O70138 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp8O70138 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp8O70138 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp8O70138 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp8O70138 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp8O70138 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp8O70138 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp8O70138 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp8O70138 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp8O70138 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp8O70138 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp8O70138 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC17.04■□□□□ 0.32
Mmp8O70138 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC17.04■□□□□ 0.32
Mmp8O70138 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp8O70138 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp8O70138 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp8O70138 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp8O70138 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC17.04■□□□□ 0.32
Mmp8O70138 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp8O70138 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Mmp8O70138 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC17.04■□□□□ 0.32
Mmp8O70138 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp8O70138 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp8O70138 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp8O70138 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp8O70138 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp8O70138 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp8O70138 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp8O70138 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp8O70138 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp8O70138 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp8O70138 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp8O70138 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Mmp8O70138 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp8O70138 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms