Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
Alx3O70137 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Alx3O70137 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Alx3O70137 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Alx3O70137 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Alx3O70137 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Alx3O70137 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Alx3O70137 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Alx3O70137 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Alx3O70137 Gm15626-201ENSMUST00000117478 868 ntBASIC12.82□□□□□ -0.36
Alx3O70137 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.82□□□□□ -0.36
Alx3O70137 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.82□□□□□ -0.36
Alx3O70137 Gm15483-201ENSMUST00000120338 456 ntBASIC12.82□□□□□ -0.36
Alx3O70137 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC12.82□□□□□ -0.36
Alx3O70137 Gm27920-201ENSMUST00000183953 96 ntBASIC12.82□□□□□ -0.36
Alx3O70137 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.82□□□□□ -0.36
Alx3O70137 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.82□□□□□ -0.36
Alx3O70137 Gm18351-201ENSMUST00000188646 883 ntBASIC12.82□□□□□ -0.36
Alx3O70137 Gm44492-201ENSMUST00000197012 141 ntBASIC12.82□□□□□ -0.36
Alx3O70137 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.82□□□□□ -0.36
Alx3O70137 Gm43275-201ENSMUST00000202053 1020 ntBASIC12.82□□□□□ -0.36
Alx3O70137 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC12.82□□□□□ -0.36
Alx3O70137 Gm45574-201ENSMUST00000210921 331 ntBASIC12.82□□□□□ -0.36
Alx3O70137 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Alx3O70137 Gm5364-201ENSMUST00000216789 889 ntBASIC12.82□□□□□ -0.36
Alx3O70137 AC174742.1-201ENSMUST00000218272 304 ntBASIC12.82□□□□□ -0.36
Alx3O70137 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Alx3O70137 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Alx3O70137 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Alx3O70137 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Alx3O70137 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Alx3O70137 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.82□□□□□ -0.36
Alx3O70137 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Alx3O70137 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Alx3O70137 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Alx3O70137 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Alx3O70137 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Alx3O70137 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Alx3O70137 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Alx3O70137 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Alx3O70137 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Alx3O70137 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Alx3O70137 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Alx3O70137 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Alx3O70137 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Alx3O70137 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Alx3O70137 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Alx3O70137 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Alx3O70137 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Alx3O70137 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Alx3O70137 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.81□□□□□ -0.36
Alx3O70137 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Alx3O70137 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Alx3O70137 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.81□□□□□ -0.36
Alx3O70137 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Alx3O70137 Gm13899-201ENSMUST00000121519 1255 ntBASIC12.81□□□□□ -0.36
Alx3O70137 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Alx3O70137 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Alx3O70137 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.81□□□□□ -0.36
Alx3O70137 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.81□□□□□ -0.36
Alx3O70137 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12.81□□□□□ -0.36
Alx3O70137 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC12.81□□□□□ -0.36
Alx3O70137 Gm37436-201ENSMUST00000193842 1085 ntBASIC12.81□□□□□ -0.36
Alx3O70137 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC12.81□□□□□ -0.36
Alx3O70137 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.81□□□□□ -0.36
Alx3O70137 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Alx3O70137 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Alx3O70137 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.81□□□□□ -0.36
Alx3O70137 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Alx3O70137 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Alx3O70137 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Alx3O70137 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Alx3O70137 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Alx3O70137 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Alx3O70137 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Alx3O70137 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Alx3O70137 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Alx3O70137 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Alx3O70137 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Alx3O70137 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Alx3O70137 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Alx3O70137 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Alx3O70137 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Alx3O70137 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Alx3O70137 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Alx3O70137 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Alx3O70137 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Alx3O70137 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Alx3O70137 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Alx3O70137 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Alx3O70137 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Alx3O70137 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Alx3O70137 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.8□□□□□ -0.36
Alx3O70137 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Alx3O70137 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Alx3O70137 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Alx3O70137 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Alx3O70137 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.8□□□□□ -0.36
Alx3O70137 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Alx3O70137 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms