Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl13O55038 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl13O55038 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl13O55038 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl13O55038 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl13O55038 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl13O55038 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl13O55038 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl13O55038 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl13O55038 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC11.84□□□□□ -0.51
Cxcl13O55038 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Cxcl13O55038 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl13O55038 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl13O55038 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Cxcl13O55038 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl13O55038 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Cxcl13O55038 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Cxcl13O55038 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcl13O55038 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcl13O55038 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcl13O55038 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcl13O55038 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcl13O55038 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC11.83□□□□□ -0.52
Cxcl13O55038 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcl13O55038 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Cxcl13O55038 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Cxcl13O55038 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcl13O55038 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcl13O55038 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcl13O55038 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcl13O55038 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC11.83□□□□□ -0.52
Cxcl13O55038 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcl13O55038 Gm8584-201ENSMUST00000171982 758 ntBASIC11.83□□□□□ -0.52
Cxcl13O55038 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC11.83□□□□□ -0.52
Cxcl13O55038 Gm3809-201ENSMUST00000180973 1006 ntBASIC11.83□□□□□ -0.52
Cxcl13O55038 Gm28911-201ENSMUST00000188837 117 ntBASIC11.83□□□□□ -0.52
Cxcl13O55038 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC11.83□□□□□ -0.52
Cxcl13O55038 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.83□□□□□ -0.52
Cxcl13O55038 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC11.83□□□□□ -0.52
Cxcl13O55038 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcl13O55038 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcl13O55038 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcl13O55038 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcl13O55038 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC11.83□□□□□ -0.52
Cxcl13O55038 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcl13O55038 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcl13O55038 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcl13O55038 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcl13O55038 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcl13O55038 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcl13O55038 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC11.83□□□□□ -0.52
Cxcl13O55038 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcl13O55038 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcl13O55038 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Cxcl13O55038 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cxcl13O55038 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Cxcl13O55038 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cxcl13O55038 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cxcl13O55038 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Cxcl13O55038 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cxcl13O55038 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cxcl13O55038 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cxcl13O55038 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Cxcl13O55038 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC11.82□□□□□ -0.52
Cxcl13O55038 Gm15678-201ENSMUST00000117573 960 ntBASIC11.82□□□□□ -0.52
Cxcl13O55038 Gm15806-201ENSMUST00000120696 955 ntBASIC11.82□□□□□ -0.52
Cxcl13O55038 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC11.82□□□□□ -0.52
Cxcl13O55038 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC11.82□□□□□ -0.52
Cxcl13O55038 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cxcl13O55038 Gm27772-201ENSMUST00000184900 187 ntBASIC11.82□□□□□ -0.52
Cxcl13O55038 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC11.82□□□□□ -0.52
Cxcl13O55038 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC11.82□□□□□ -0.52
Cxcl13O55038 AC162801.1-201ENSMUST00000220612 198 ntBASIC11.82□□□□□ -0.52
Cxcl13O55038 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC11.82□□□□□ -0.52
Cxcl13O55038 AC166997.1-201ENSMUST00000225122 572 ntBASIC11.82□□□□□ -0.52
Cxcl13O55038 AC155252.1-201ENSMUST00000226462 1208 ntBASIC11.82□□□□□ -0.52
Cxcl13O55038 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Cxcl13O55038 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cxcl13O55038 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cxcl13O55038 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cxcl13O55038 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Cxcl13O55038 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cxcl13O55038 Gm43598-201ENSMUST00000202482 2479 ntBASIC11.82□□□□□ -0.52
Cxcl13O55038 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC11.82□□□□□ -0.52
Cxcl13O55038 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cxcl13O55038 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cxcl13O55038 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cxcl13O55038 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cxcl13O55038 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Cxcl13O55038 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cxcl13O55038 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cxcl13O55038 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Cxcl13O55038 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cxcl13O55038 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl13O55038 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl13O55038 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl13O55038 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl13O55038 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl13O55038 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Cxcl13O55038 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms