Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Itgb3O54890 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Itgb3O54890 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Itgb3O54890 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Itgb3O54890 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Itgb3O54890 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Itgb3O54890 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Itgb3O54890 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Itgb3O54890 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.85□□□□□ -0.03
Itgb3O54890 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Itgb3O54890 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.85□□□□□ -0.03
Itgb3O54890 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Itgb3O54890 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.85□□□□□ -0.03
Itgb3O54890 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.85□□□□□ -0.03
Itgb3O54890 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Itgb3O54890 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Itgb3O54890 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Itgb3O54890 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Itgb3O54890 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Itgb3O54890 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.85□□□□□ -0.03
Itgb3O54890 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
Itgb3O54890 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Itgb3O54890 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.85□□□□□ -0.03
Itgb3O54890 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Itgb3O54890 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Itgb3O54890 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Itgb3O54890 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
Itgb3O54890 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Itgb3O54890 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Itgb3O54890 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Itgb3O54890 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Itgb3O54890 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Itgb3O54890 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Itgb3O54890 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Itgb3O54890 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Itgb3O54890 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Itgb3O54890 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Itgb3O54890 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Itgb3O54890 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Itgb3O54890 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.84□□□□□ -0.03
Itgb3O54890 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.84□□□□□ -0.03
Itgb3O54890 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.84□□□□□ -0.03
Itgb3O54890 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.84□□□□□ -0.03
Itgb3O54890 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.84□□□□□ -0.03
Itgb3O54890 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Itgb3O54890 Gm17795-201ENSMUST00000214505 757 ntBASIC14.84□□□□□ -0.03
Itgb3O54890 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.84□□□□□ -0.03
Itgb3O54890 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Itgb3O54890 Mir497b-201ENSMUST00000093601 125 ntBASIC14.84□□□□□ -0.03
Itgb3O54890 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Itgb3O54890 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Itgb3O54890 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Itgb3O54890 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Itgb3O54890 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Itgb3O54890 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Itgb3O54890 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.84□□□□□ -0.03
Itgb3O54890 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Itgb3O54890 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Itgb3O54890 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Itgb3O54890 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Itgb3O54890 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Itgb3O54890 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Itgb3O54890 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.83□□□□□ -0.03
Itgb3O54890 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.03
Itgb3O54890 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Itgb3O54890 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Itgb3O54890 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Itgb3O54890 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.83□□□□□ -0.04
Itgb3O54890 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Itgb3O54890 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.83□□□□□ -0.04
Itgb3O54890 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Itgb3O54890 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Itgb3O54890 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.83□□□□□ -0.04
Itgb3O54890 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Itgb3O54890 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Itgb3O54890 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Itgb3O54890 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Itgb3O54890 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Itgb3O54890 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Itgb3O54890 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Itgb3O54890 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Itgb3O54890 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Itgb3O54890 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Itgb3O54890 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.83□□□□□ -0.04
Itgb3O54890 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.83□□□□□ -0.04
Itgb3O54890 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Itgb3O54890 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Itgb3O54890 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Itgb3O54890 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Itgb3O54890 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Itgb3O54890 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Itgb3O54890 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Itgb3O54890 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Itgb3O54890 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Itgb3O54890 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Itgb3O54890 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Itgb3O54890 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Itgb3O54890 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Itgb3O54890 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.82□□□□□ -0.04
Itgb3O54890 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms