Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 AC155252.1-201ENSMUST00000226462 1208 ntBASIC15.45■□□□□ 0.06
Sptlc1O35704 AC155729.1-201ENSMUST00000227758 544 ntBASIC15.45■□□□□ 0.06
Sptlc1O35704 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.45■□□□□ 0.06
Sptlc1O35704 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sptlc1O35704 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sptlc1O35704 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Sptlc1O35704 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Sptlc1O35704 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sptlc1O35704 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.45■□□□□ 0.06
Sptlc1O35704 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sptlc1O35704 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Sptlc1O35704 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sptlc1O35704 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.44■□□□□ 0.06
Sptlc1O35704 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Sptlc1O35704 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sptlc1O35704 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Sptlc1O35704 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sptlc1O35704 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sptlc1O35704 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sptlc1O35704 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sptlc1O35704 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sptlc1O35704 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.44■□□□□ 0.06
Sptlc1O35704 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sptlc1O35704 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.44■□□□□ 0.06
Sptlc1O35704 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC15.44■□□□□ 0.06
Sptlc1O35704 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC15.44■□□□□ 0.06
Sptlc1O35704 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC15.44■□□□□ 0.06
Sptlc1O35704 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sptlc1O35704 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sptlc1O35704 Gm17150-201ENSMUST00000165577 381 ntBASIC15.44■□□□□ 0.06
Sptlc1O35704 Mir7085-201ENSMUST00000184353 66 ntBASIC15.44■□□□□ 0.06
Sptlc1O35704 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC15.44■□□□□ 0.06
Sptlc1O35704 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC15.44■□□□□ 0.06
Sptlc1O35704 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sptlc1O35704 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC15.44■□□□□ 0.06
Sptlc1O35704 AC156560.2-201ENSMUST00000221232 264 ntBASIC15.44■□□□□ 0.06
Sptlc1O35704 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sptlc1O35704 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sptlc1O35704 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sptlc1O35704 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Sptlc1O35704 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sptlc1O35704 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sptlc1O35704 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Sptlc1O35704 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sptlc1O35704 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC15.43■□□□□ 0.06
Sptlc1O35704 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sptlc1O35704 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sptlc1O35704 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
Sptlc1O35704 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sptlc1O35704 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Sptlc1O35704 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sptlc1O35704 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC15.43■□□□□ 0.06
Sptlc1O35704 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Sptlc1O35704 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sptlc1O35704 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sptlc1O35704 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sptlc1O35704 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.43■□□□□ 0.06
Sptlc1O35704 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sptlc1O35704 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sptlc1O35704 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sptlc1O35704 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC15.43■□□□□ 0.06
Sptlc1O35704 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sptlc1O35704 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sptlc1O35704 Gm38018-201ENSMUST00000195651 540 ntBASIC15.43■□□□□ 0.06
Sptlc1O35704 Gm44772-201ENSMUST00000207623 1191 ntBASIC15.43■□□□□ 0.06
Sptlc1O35704 Gm18027-201ENSMUST00000218947 619 ntBASIC15.43■□□□□ 0.06
Sptlc1O35704 AC150560.1-201ENSMUST00000227731 1187 ntBASIC15.43■□□□□ 0.06
Sptlc1O35704 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Sptlc1O35704 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sptlc1O35704 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Sptlc1O35704 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sptlc1O35704 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Sptlc1O35704 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sptlc1O35704 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sptlc1O35704 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sptlc1O35704 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.43■□□□□ 0.06
Sptlc1O35704 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Sptlc1O35704 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sptlc1O35704 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sptlc1O35704 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.43■□□□□ 0.06
Sptlc1O35704 Gm9109-201ENSMUST00000120254 1405 ntBASIC15.43■□□□□ 0.06
Sptlc1O35704 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Sptlc1O35704 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sptlc1O35704 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sptlc1O35704 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sptlc1O35704 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sptlc1O35704 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sptlc1O35704 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC15.42■□□□□ 0.06
Sptlc1O35704 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sptlc1O35704 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Sptlc1O35704 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sptlc1O35704 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Sptlc1O35704 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
Sptlc1O35704 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Sptlc1O35704 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Sptlc1O35704 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC15.42■□□□□ 0.06
Sptlc1O35704 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC15.42■□□□□ 0.06
Sptlc1O35704 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Sptlc1O35704 Gm44719-201ENSMUST00000206404 149 ntBASIC15.42■□□□□ 0.06
Sptlc1O35704 Gm18307-201ENSMUST00000206864 949 ntBASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms