Protein–RNA interactions for Protein: O35305

Tnfrsf11a, Tumor necrosis factor receptor superfamily member 11A, mousemouse

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11aO35305 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tnfrsf11aO35305 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Tnfrsf11aO35305 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC15.08■□□□□ 0
Tnfrsf11aO35305 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC15.08■□□□□ 0
Tnfrsf11aO35305 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tnfrsf11aO35305 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC15.08■□□□□ 0
Tnfrsf11aO35305 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tnfrsf11aO35305 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tnfrsf11aO35305 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tnfrsf11aO35305 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.08■□□□□ 0
Tnfrsf11aO35305 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC15.08■□□□□ 0
Tnfrsf11aO35305 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC15.08■□□□□ 0
Tnfrsf11aO35305 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tnfrsf11aO35305 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Tnfrsf11aO35305 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Tnfrsf11aO35305 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Tnfrsf11aO35305 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC15.08■□□□□ 0
Tnfrsf11aO35305 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC15.08■□□□□ 0
Tnfrsf11aO35305 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.08■□□□□ 0
Tnfrsf11aO35305 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC15.08■□□□□ 0
Tnfrsf11aO35305 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tnfrsf11aO35305 Matn2-206ENSMUST00000228570 2798 ntBASIC15.07■□□□□ 0
Tnfrsf11aO35305 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.07■□□□□ 0
Tnfrsf11aO35305 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Tnfrsf11aO35305 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tnfrsf11aO35305 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Tnfrsf11aO35305 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Tnfrsf11aO35305 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tnfrsf11aO35305 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
Tnfrsf11aO35305 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC15.07■□□□□ 0
Tnfrsf11aO35305 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tnfrsf11aO35305 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Tnfrsf11aO35305 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tnfrsf11aO35305 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tnfrsf11aO35305 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Tnfrsf11aO35305 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC15.07■□□□□ 0
Tnfrsf11aO35305 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tnfrsf11aO35305 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC15.07■□□□□ 0
Tnfrsf11aO35305 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC15.07■□□□□ 0
Tnfrsf11aO35305 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tnfrsf11aO35305 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC15.07■□□□□ 0
Tnfrsf11aO35305 Gm43399-201ENSMUST00000202546 2374 ntBASIC15.07■□□□□ 0
Tnfrsf11aO35305 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tnfrsf11aO35305 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Tnfrsf11aO35305 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC15.07■□□□□ 0
Tnfrsf11aO35305 AC124751.1-201ENSMUST00000222716 1408 ntBASIC15.07■□□□□ 0
Tnfrsf11aO35305 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC15.07■□□□□ 0
Tnfrsf11aO35305 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tnfrsf11aO35305 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tnfrsf11aO35305 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf11aO35305 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf11aO35305 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Tnfrsf11aO35305 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf11aO35305 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf11aO35305 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf11aO35305 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf11aO35305 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf11aO35305 Gm15393-201ENSMUST00000120499 219 ntBASIC15.06■□□□□ 0
Tnfrsf11aO35305 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Tnfrsf11aO35305 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf11aO35305 Gm29741-201ENSMUST00000192667 421 ntBASIC15.06■□□□□ 0
Tnfrsf11aO35305 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf11aO35305 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf11aO35305 AC154846.1-201ENSMUST00000226278 862 ntBASIC15.06■□□□□ 0
Tnfrsf11aO35305 AC158982.1-201ENSMUST00000228377 901 ntBASIC15.06■□□□□ 0
Tnfrsf11aO35305 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf11aO35305 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf11aO35305 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf11aO35305 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf11aO35305 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC15.06■□□□□ 0
Tnfrsf11aO35305 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf11aO35305 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf11aO35305 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf11aO35305 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC15.06■□□□□ 0
Tnfrsf11aO35305 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf11aO35305 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf11aO35305 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf11aO35305 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Tnfrsf11aO35305 Gm12626-201ENSMUST00000117339 1983 ntBASIC15.05■□□□□ 0
Tnfrsf11aO35305 Gm12623-201ENSMUST00000119849 1983 ntBASIC15.05■□□□□ 0
Tnfrsf11aO35305 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Tnfrsf11aO35305 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Tnfrsf11aO35305 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Tnfrsf11aO35305 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Tnfrsf11aO35305 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Tnfrsf11aO35305 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC15.05■□□□□ -0
Tnfrsf11aO35305 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tnfrsf11aO35305 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC15.05■□□□□ -0
Tnfrsf11aO35305 Gm12585-201ENSMUST00000117307 290 ntBASIC15.05■□□□□ -0
Tnfrsf11aO35305 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC15.05■□□□□ -0
Tnfrsf11aO35305 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tnfrsf11aO35305 Gm2445-201ENSMUST00000182798 989 ntBASIC15.05■□□□□ -0
Tnfrsf11aO35305 Gm29667-201ENSMUST00000190817 490 ntBASIC15.05■□□□□ -0
Tnfrsf11aO35305 Gm10766-202ENSMUST00000194123 606 ntBASIC15.05■□□□□ -0
Tnfrsf11aO35305 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC15.05■□□□□ -0
Tnfrsf11aO35305 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC15.05■□□□□ -0
Tnfrsf11aO35305 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC15.05■□□□□ -0
Tnfrsf11aO35305 AC238811.1-201ENSMUST00000225302 441 ntBASIC15.05■□□□□ -0
Tnfrsf11aO35305 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC15.05■□□□□ -0
Tnfrsf11aO35305 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 90.3 ms