Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.21□□□□□ -0.29
Cx3cl1O35188 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.21□□□□□ -0.29
Cx3cl1O35188 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
Cx3cl1O35188 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cx3cl1O35188 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cx3cl1O35188 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cx3cl1O35188 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.21□□□□□ -0.29
Cx3cl1O35188 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cx3cl1O35188 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Cx3cl1O35188 Gm46209-201ENSMUST00000217912 553 ntBASIC13.21□□□□□ -0.29
Cx3cl1O35188 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.21□□□□□ -0.29
Cx3cl1O35188 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.21□□□□□ -0.29
Cx3cl1O35188 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cx3cl1O35188 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cx3cl1O35188 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cx3cl1O35188 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cx3cl1O35188 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.21□□□□□ -0.29
Cx3cl1O35188 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cx3cl1O35188 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cx3cl1O35188 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cx3cl1O35188 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cx3cl1O35188 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cx3cl1O35188 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cx3cl1O35188 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.21□□□□□ -0.3
Cx3cl1O35188 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Cx3cl1O35188 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cx3cl1O35188 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cx3cl1O35188 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Cx3cl1O35188 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cx3cl1O35188 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cx3cl1O35188 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cx3cl1O35188 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cx3cl1O35188 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cx3cl1O35188 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cx3cl1O35188 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.2□□□□□ -0.3
Cx3cl1O35188 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cx3cl1O35188 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cx3cl1O35188 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.2□□□□□ -0.3
Cx3cl1O35188 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cx3cl1O35188 Gm25925-201ENSMUST00000158314 306 ntBASIC13.2□□□□□ -0.3
Cx3cl1O35188 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.2□□□□□ -0.3
Cx3cl1O35188 Gm27321-201ENSMUST00000185021 205 ntBASIC13.2□□□□□ -0.3
Cx3cl1O35188 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.2□□□□□ -0.3
Cx3cl1O35188 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cx3cl1O35188 Gm9063-201ENSMUST00000223299 582 ntBASIC13.2□□□□□ -0.3
Cx3cl1O35188 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cx3cl1O35188 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cx3cl1O35188 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cx3cl1O35188 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cx3cl1O35188 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Cx3cl1O35188 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cx3cl1O35188 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cx3cl1O35188 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cx3cl1O35188 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.2□□□□□ -0.3
Cx3cl1O35188 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cx3cl1O35188 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cx3cl1O35188 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cx3cl1O35188 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cx3cl1O35188 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cx3cl1O35188 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cx3cl1O35188 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cx3cl1O35188 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cx3cl1O35188 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.2□□□□□ -0.3
Cx3cl1O35188 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cx3cl1O35188 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cx3cl1O35188 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.19□□□□□ -0.3
Cx3cl1O35188 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cx3cl1O35188 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cx3cl1O35188 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.19□□□□□ -0.3
Cx3cl1O35188 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cx3cl1O35188 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cx3cl1O35188 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cx3cl1O35188 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cx3cl1O35188 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.19□□□□□ -0.3
Cx3cl1O35188 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cx3cl1O35188 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cx3cl1O35188 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Cx3cl1O35188 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cx3cl1O35188 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cx3cl1O35188 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cx3cl1O35188 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.19□□□□□ -0.3
Cx3cl1O35188 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cx3cl1O35188 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.19□□□□□ -0.3
Cx3cl1O35188 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cx3cl1O35188 Gm20949-201ENSMUST00000206478 952 ntBASIC13.19□□□□□ -0.3
Cx3cl1O35188 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.19□□□□□ -0.3
Cx3cl1O35188 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cx3cl1O35188 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cx3cl1O35188 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cx3cl1O35188 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cx3cl1O35188 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cx3cl1O35188 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cx3cl1O35188 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.19□□□□□ -0.3
Cx3cl1O35188 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cx3cl1O35188 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cx3cl1O35188 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cx3cl1O35188 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cx3cl1O35188 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.19□□□□□ -0.3
Cx3cl1O35188 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cx3cl1O35188 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms