Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Polr1aO35134 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
Polr1aO35134 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Polr1aO35134 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC21.18■□□□□ 0.98
Polr1aO35134 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Polr1aO35134 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Polr1aO35134 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Polr1aO35134 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Polr1aO35134 Gm22323-201ENSMUST00000103832 109 ntBASIC21.18■□□□□ 0.98
Polr1aO35134 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC21.18■□□□□ 0.98
Polr1aO35134 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Polr1aO35134 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Polr1aO35134 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC21.18■□□□□ 0.98
Polr1aO35134 Gm7895-201ENSMUST00000187459 1173 ntBASIC21.18■□□□□ 0.98
Polr1aO35134 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC21.18■□□□□ 0.98
Polr1aO35134 AC122305.4-201ENSMUST00000216159 1206 ntBASIC21.18■□□□□ 0.98
Polr1aO35134 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Polr1aO35134 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC21.18■□□□□ 0.98
Polr1aO35134 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Polr1aO35134 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Polr1aO35134 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC21.18■□□□□ 0.98
Polr1aO35134 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Polr1aO35134 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
Polr1aO35134 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Polr1aO35134 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Polr1aO35134 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Polr1aO35134 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Polr1aO35134 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Polr1aO35134 AC153366.2-201ENSMUST00000219461 1984 ntBASIC21.17■□□□□ 0.98
Polr1aO35134 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Polr1aO35134 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Polr1aO35134 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Polr1aO35134 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Polr1aO35134 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Polr1aO35134 Gm6447-201ENSMUST00000118905 835 ntBASIC21.17■□□□□ 0.98
Polr1aO35134 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Polr1aO35134 Gm38000-201ENSMUST00000192390 1215 ntBASIC21.17■□□□□ 0.98
Polr1aO35134 Gm45865-201ENSMUST00000211815 945 ntBASIC21.17■□□□□ 0.98
Polr1aO35134 Gm9368-201ENSMUST00000219348 831 ntBASIC21.17■□□□□ 0.98
Polr1aO35134 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Polr1aO35134 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Polr1aO35134 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Polr1aO35134 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC21.17■□□□□ 0.98
Polr1aO35134 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Polr1aO35134 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC21.16■□□□□ 0.98
Polr1aO35134 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Polr1aO35134 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Polr1aO35134 Gm28693-202ENSMUST00000190758 331 ntBASIC21.16■□□□□ 0.98
Polr1aO35134 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC21.16■□□□□ 0.98
Polr1aO35134 Ighv1-62-201ENSMUST00000193406 350 ntBASIC21.16■□□□□ 0.98
Polr1aO35134 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC21.16■□□□□ 0.98
Polr1aO35134 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Polr1aO35134 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
Polr1aO35134 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Polr1aO35134 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Polr1aO35134 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Polr1aO35134 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Polr1aO35134 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC21.16■□□□□ 0.98
Polr1aO35134 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Polr1aO35134 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Polr1aO35134 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC21.16■□□□□ 0.98
Polr1aO35134 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC21.16■□□□□ 0.98
Polr1aO35134 Gm38049-201ENSMUST00000195698 1372 ntBASIC21.16■□□□□ 0.98
Polr1aO35134 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Polr1aO35134 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Polr1aO35134 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Polr1aO35134 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Polr1aO35134 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Polr1aO35134 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
Polr1aO35134 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Polr1aO35134 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Polr1aO35134 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Polr1aO35134 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Polr1aO35134 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Polr1aO35134 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Polr1aO35134 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Polr1aO35134 Gm38197-201ENSMUST00000192320 2122 ntBASIC21.15■□□□□ 0.98
Polr1aO35134 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC21.15■□□□□ 0.98
Polr1aO35134 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Polr1aO35134 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC21.15■□□□□ 0.98
Polr1aO35134 Gm24526-201ENSMUST00000082921 158 ntBASIC21.15■□□□□ 0.98
Polr1aO35134 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Polr1aO35134 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Polr1aO35134 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Polr1aO35134 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Polr1aO35134 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Polr1aO35134 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC21.15■□□□□ 0.98
Polr1aO35134 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Polr1aO35134 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Polr1aO35134 Gm11591-201ENSMUST00000120063 702 ntBASIC21.15■□□□□ 0.98
Polr1aO35134 Gm7809-201ENSMUST00000153199 742 ntBASIC21.15■□□□□ 0.98
Polr1aO35134 Gm2991-201ENSMUST00000173338 480 ntBASIC21.15■□□□□ 0.98
Polr1aO35134 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC21.15■□□□□ 0.98
Polr1aO35134 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Polr1aO35134 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Polr1aO35134 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC21.15■□□□□ 0.98
Polr1aO35134 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
Polr1aO35134 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Polr1aO35134 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC21.14■□□□□ 0.98
Polr1aO35134 AC122335.2-201ENSMUST00000213901 6181 ntBASIC21.14■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms