Protein–RNA interactions for Protein: O09111

Ndufb11, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial, mousemouse

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb11O09111 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ndufb11O09111 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ndufb11O09111 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Ndufb11O09111 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ndufb11O09111 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC11.18□□□□□ -0.62
Ndufb11O09111 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC11.18□□□□□ -0.62
Ndufb11O09111 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ndufb11O09111 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
Ndufb11O09111 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ndufb11O09111 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Ndufb11O09111 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC11.18□□□□□ -0.62
Ndufb11O09111 Krtap5-1-202ENSMUST00000188274 742 ntBASIC11.18□□□□□ -0.62
Ndufb11O09111 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC11.18□□□□□ -0.62
Ndufb11O09111 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC11.18□□□□□ -0.62
Ndufb11O09111 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC11.18□□□□□ -0.62
Ndufb11O09111 Arhgef4-208ENSMUST00000211073 171 ntBASIC11.18□□□□□ -0.62
Ndufb11O09111 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ndufb11O09111 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ndufb11O09111 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Ndufb11O09111 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ndufb11O09111 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Ndufb11O09111 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ndufb11O09111 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ndufb11O09111 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ndufb11O09111 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ndufb11O09111 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ndufb11O09111 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ndufb11O09111 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ndufb11O09111 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ndufb11O09111 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ndufb11O09111 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ndufb11O09111 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ndufb11O09111 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
Ndufb11O09111 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.17□□□□□ -0.62
Ndufb11O09111 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ndufb11O09111 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ndufb11O09111 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ndufb11O09111 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ndufb11O09111 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ndufb11O09111 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ndufb11O09111 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ndufb11O09111 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ndufb11O09111 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC11.17□□□□□ -0.62
Ndufb11O09111 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ndufb11O09111 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ndufb11O09111 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ndufb11O09111 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ndufb11O09111 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ndufb11O09111 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ndufb11O09111 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Ndufb11O09111 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ndufb11O09111 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Ndufb11O09111 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ndufb11O09111 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ndufb11O09111 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.17□□□□□ -0.62
Ndufb11O09111 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ndufb11O09111 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.17□□□□□ -0.62
Ndufb11O09111 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Ndufb11O09111 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC11.17□□□□□ -0.62
Ndufb11O09111 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC11.17□□□□□ -0.62
Ndufb11O09111 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC11.17□□□□□ -0.62
Ndufb11O09111 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC11.17□□□□□ -0.62
Ndufb11O09111 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ndufb11O09111 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC11.17□□□□□ -0.62
Ndufb11O09111 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC11.17□□□□□ -0.62
Ndufb11O09111 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ndufb11O09111 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ndufb11O09111 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ndufb11O09111 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.62
Ndufb11O09111 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ndufb11O09111 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ndufb11O09111 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ndufb11O09111 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ndufb11O09111 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ndufb11O09111 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ndufb11O09111 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Ndufb11O09111 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ndufb11O09111 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ndufb11O09111 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ndufb11O09111 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC11.17□□□□□ -0.62
Ndufb11O09111 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.17□□□□□ -0.62
Ndufb11O09111 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ndufb11O09111 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ndufb11O09111 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ndufb11O09111 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ndufb11O09111 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ndufb11O09111 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ndufb11O09111 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ndufb11O09111 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Ndufb11O09111 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ndufb11O09111 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ndufb11O09111 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.16□□□□□ -0.62
Ndufb11O09111 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.16□□□□□ -0.62
Ndufb11O09111 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Ndufb11O09111 Syt7-205ENSMUST00000224135 1557 ntBASIC11.16□□□□□ -0.62
Ndufb11O09111 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ndufb11O09111 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ndufb11O09111 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ndufb11O09111 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.16□□□□□ -0.62
Ndufb11O09111 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms