Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Ebf3O08791 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.59□□□□□ -0.07
Ebf3O08791 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ebf3O08791 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ebf3O08791 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ebf3O08791 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ebf3O08791 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ebf3O08791 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.59□□□□□ -0.07
Ebf3O08791 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Ebf3O08791 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ebf3O08791 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ebf3O08791 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ebf3O08791 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Ebf3O08791 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ebf3O08791 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ebf3O08791 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ebf3O08791 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.58□□□□□ -0.08
Ebf3O08791 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Ebf3O08791 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ebf3O08791 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Ebf3O08791 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.58□□□□□ -0.08
Ebf3O08791 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ebf3O08791 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ebf3O08791 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ebf3O08791 Gm15460-201ENSMUST00000118147 391 ntBASIC14.58□□□□□ -0.08
Ebf3O08791 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.58□□□□□ -0.08
Ebf3O08791 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Ebf3O08791 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.58□□□□□ -0.08
Ebf3O08791 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.58□□□□□ -0.08
Ebf3O08791 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC14.58□□□□□ -0.08
Ebf3O08791 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
Ebf3O08791 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ebf3O08791 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ebf3O08791 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ebf3O08791 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Ebf3O08791 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Ebf3O08791 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ebf3O08791 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ebf3O08791 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ebf3O08791 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Ebf3O08791 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ebf3O08791 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ebf3O08791 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ebf3O08791 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ebf3O08791 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ebf3O08791 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.57□□□□□ -0.08
Ebf3O08791 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Ebf3O08791 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ebf3O08791 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ebf3O08791 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ebf3O08791 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ebf3O08791 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ebf3O08791 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ebf3O08791 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ebf3O08791 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC14.57□□□□□ -0.08
Ebf3O08791 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ebf3O08791 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ebf3O08791 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.57□□□□□ -0.08
Ebf3O08791 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ebf3O08791 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ebf3O08791 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Ebf3O08791 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ebf3O08791 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Ebf3O08791 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ebf3O08791 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ebf3O08791 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ebf3O08791 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ebf3O08791 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.57□□□□□ -0.08
Ebf3O08791 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ebf3O08791 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ebf3O08791 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ebf3O08791 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ebf3O08791 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.56□□□□□ -0.08
Ebf3O08791 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Ebf3O08791 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
Ebf3O08791 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ebf3O08791 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ebf3O08791 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ebf3O08791 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ebf3O08791 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ebf3O08791 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.56□□□□□ -0.08
Ebf3O08791 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ebf3O08791 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ebf3O08791 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.56□□□□□ -0.08
Ebf3O08791 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.56□□□□□ -0.08
Ebf3O08791 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ebf3O08791 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Ebf3O08791 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.56□□□□□ -0.08
Ebf3O08791 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC14.56□□□□□ -0.08
Ebf3O08791 Gm10275-202ENSMUST00000168697 495 ntBASIC14.56□□□□□ -0.08
Ebf3O08791 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ebf3O08791 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.56□□□□□ -0.08
Ebf3O08791 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.56□□□□□ -0.08
Ebf3O08791 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.56□□□□□ -0.08
Ebf3O08791 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Ebf3O08791 Gm10275-201ENSMUST00000092620 635 ntBASIC14.56□□□□□ -0.08
Ebf3O08791 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ebf3O08791 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ebf3O08791 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.56□□□□□ -0.08
Ebf3O08791 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms