Protein–RNA interactions for Protein: O08788

Dctn1, Dynactin subunit 1, mousemouse

Predictions only

Length 1,281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dctn1O08788 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC17.24■□□□□ 0.35
Dctn1O08788 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.24■□□□□ 0.35
Dctn1O08788 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Dctn1O08788 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.24■□□□□ 0.35
Dctn1O08788 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC17.24■□□□□ 0.35
Dctn1O08788 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Dctn1O08788 Gm6159-201ENSMUST00000191249 1724 ntBASIC17.24■□□□□ 0.35
Dctn1O08788 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Dctn1O08788 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Dctn1O08788 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Dctn1O08788 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Dctn1O08788 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Dctn1O08788 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Dctn1O08788 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Dctn1O08788 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Dctn1O08788 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Dctn1O08788 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Dctn1O08788 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC17.23■□□□□ 0.35
Dctn1O08788 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Dctn1O08788 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Dctn1O08788 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Dctn1O08788 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Dctn1O08788 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Dctn1O08788 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Dctn1O08788 Gm12485-201ENSMUST00000119641 291 ntBASIC17.23■□□□□ 0.35
Dctn1O08788 Gm16342-201ENSMUST00000124025 1025 ntBASIC17.23■□□□□ 0.35
Dctn1O08788 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC17.23■□□□□ 0.35
Dctn1O08788 Gm8062-201ENSMUST00000139696 444 ntBASIC17.23■□□□□ 0.35
Dctn1O08788 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC17.23■□□□□ 0.35
Dctn1O08788 Gm27731-201ENSMUST00000185192 107 ntBASIC17.23■□□□□ 0.35
Dctn1O08788 Gm5069-202ENSMUST00000192714 1011 ntBASIC17.23■□□□□ 0.35
Dctn1O08788 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC17.23■□□□□ 0.35
Dctn1O08788 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Dctn1O08788 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC17.23■□□□□ 0.35
Dctn1O08788 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Dctn1O08788 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Dctn1O08788 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Dctn1O08788 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Dctn1O08788 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Dctn1O08788 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Dctn1O08788 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Dctn1O08788 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.22■□□□□ 0.35
Dctn1O08788 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Dctn1O08788 AC121801.1-201ENSMUST00000225363 1899 ntBASIC17.22■□□□□ 0.35
Dctn1O08788 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Dctn1O08788 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Dctn1O08788 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Dctn1O08788 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Dctn1O08788 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Dctn1O08788 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Dctn1O08788 Gm37424-201ENSMUST00000191727 561 ntBASIC17.22■□□□□ 0.35
Dctn1O08788 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC17.22■□□□□ 0.35
Dctn1O08788 Gm45331-201ENSMUST00000209868 554 ntBASIC17.22■□□□□ 0.35
Dctn1O08788 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Dctn1O08788 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
Dctn1O08788 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Dctn1O08788 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Dctn1O08788 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Dctn1O08788 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Dctn1O08788 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Dctn1O08788 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Dctn1O08788 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Dctn1O08788 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Dctn1O08788 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC17.21■□□□□ 0.35
Dctn1O08788 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Dctn1O08788 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC17.21■□□□□ 0.35
Dctn1O08788 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Dctn1O08788 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.21■□□□□ 0.35
Dctn1O08788 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Dctn1O08788 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Dctn1O08788 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Dctn1O08788 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Dctn1O08788 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Dctn1O08788 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Dctn1O08788 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Dctn1O08788 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Dctn1O08788 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Dctn1O08788 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Dctn1O08788 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Dctn1O08788 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Dctn1O08788 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Dctn1O08788 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Dctn1O08788 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Dctn1O08788 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC17.21■□□□□ 0.35
Dctn1O08788 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Dctn1O08788 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC17.21■□□□□ 0.35
Dctn1O08788 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC17.21■□□□□ 0.35
Dctn1O08788 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Dctn1O08788 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC17.21■□□□□ 0.35
Dctn1O08788 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Dctn1O08788 AC122459.1-201ENSMUST00000228373 885 ntBASIC17.21■□□□□ 0.35
Dctn1O08788 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
Dctn1O08788 Gm10012-201ENSMUST00000078252 192 ntBASIC17.21■□□□□ 0.35
Dctn1O08788 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Dctn1O08788 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Dctn1O08788 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
Dctn1O08788 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Dctn1O08788 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Dctn1O08788 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Dctn1O08788 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms