Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Shisa8J3QNX5 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.8□□□□□ -0.36
Shisa8J3QNX5 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shisa8J3QNX5 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Shisa8J3QNX5 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shisa8J3QNX5 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.8□□□□□ -0.36
Shisa8J3QNX5 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.8□□□□□ -0.36
Shisa8J3QNX5 Gm15483-201ENSMUST00000120338 456 ntBASIC12.8□□□□□ -0.36
Shisa8J3QNX5 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.8□□□□□ -0.36
Shisa8J3QNX5 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.8□□□□□ -0.36
Shisa8J3QNX5 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC12.8□□□□□ -0.36
Shisa8J3QNX5 Gm10060-201ENSMUST00000212002 111 ntBASIC12.8□□□□□ -0.36
Shisa8J3QNX5 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Shisa8J3QNX5 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shisa8J3QNX5 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shisa8J3QNX5 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shisa8J3QNX5 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shisa8J3QNX5 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shisa8J3QNX5 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Shisa8J3QNX5 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shisa8J3QNX5 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shisa8J3QNX5 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shisa8J3QNX5 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.8□□□□□ -0.36
Shisa8J3QNX5 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shisa8J3QNX5 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Shisa8J3QNX5 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shisa8J3QNX5 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shisa8J3QNX5 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Shisa8J3QNX5 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.8□□□□□ -0.36
Shisa8J3QNX5 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.8□□□□□ -0.36
Shisa8J3QNX5 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shisa8J3QNX5 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shisa8J3QNX5 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shisa8J3QNX5 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shisa8J3QNX5 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shisa8J3QNX5 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Shisa8J3QNX5 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shisa8J3QNX5 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.79□□□□□ -0.36
Shisa8J3QNX5 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shisa8J3QNX5 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Shisa8J3QNX5 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shisa8J3QNX5 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Shisa8J3QNX5 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Shisa8J3QNX5 Gm27628-201ENSMUST00000184911 107 ntBASIC12.79□□□□□ -0.36
Shisa8J3QNX5 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC12.79□□□□□ -0.36
Shisa8J3QNX5 Umpk-ps-201ENSMUST00000211897 827 ntBASIC12.79□□□□□ -0.36
Shisa8J3QNX5 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shisa8J3QNX5 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shisa8J3QNX5 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shisa8J3QNX5 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.79□□□□□ -0.36
Shisa8J3QNX5 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shisa8J3QNX5 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Shisa8J3QNX5 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shisa8J3QNX5 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Shisa8J3QNX5 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Shisa8J3QNX5 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Shisa8J3QNX5 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shisa8J3QNX5 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shisa8J3QNX5 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shisa8J3QNX5 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shisa8J3QNX5 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.78□□□□□ -0.36
Shisa8J3QNX5 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shisa8J3QNX5 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Shisa8J3QNX5 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shisa8J3QNX5 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shisa8J3QNX5 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Shisa8J3QNX5 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shisa8J3QNX5 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shisa8J3QNX5 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shisa8J3QNX5 Gm9385-201ENSMUST00000117563 472 ntBASIC12.78□□□□□ -0.36
Shisa8J3QNX5 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shisa8J3QNX5 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Shisa8J3QNX5 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shisa8J3QNX5 Gm45747-201ENSMUST00000212203 999 ntBASIC12.78□□□□□ -0.36
Shisa8J3QNX5 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC12.78□□□□□ -0.36
Shisa8J3QNX5 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shisa8J3QNX5 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC12.78□□□□□ -0.36
Shisa8J3QNX5 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Shisa8J3QNX5 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shisa8J3QNX5 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shisa8J3QNX5 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shisa8J3QNX5 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.78□□□□□ -0.36
Shisa8J3QNX5 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Shisa8J3QNX5 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shisa8J3QNX5 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shisa8J3QNX5 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shisa8J3QNX5 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Shisa8J3QNX5 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shisa8J3QNX5 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Shisa8J3QNX5 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.78□□□□□ -0.36
Shisa8J3QNX5 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shisa8J3QNX5 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shisa8J3QNX5 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Shisa8J3QNX5 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shisa8J3QNX5 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shisa8J3QNX5 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Shisa8J3QNX5 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Shisa8J3QNX5 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Shisa8J3QNX5 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Shisa8J3QNX5 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms