Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.21□□□□□ -0.13
Ccdc149F6V035 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc149F6V035 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc149F6V035 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc149F6V035 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc149F6V035 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc149F6V035 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc149F6V035 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc149F6V035 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc149F6V035 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc149F6V035 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc149F6V035 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc149F6V035 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc149F6V035 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc149F6V035 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc149F6V035 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Ccdc149F6V035 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc149F6V035 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc149F6V035 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.21□□□□□ -0.13
Ccdc149F6V035 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Ccdc149F6V035 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Ccdc149F6V035 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.21□□□□□ -0.14
Ccdc149F6V035 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ccdc149F6V035 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.21□□□□□ -0.14
Ccdc149F6V035 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Ccdc149F6V035 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.14
Ccdc149F6V035 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ccdc149F6V035 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc149F6V035 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc149F6V035 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc149F6V035 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.2□□□□□ -0.14
Ccdc149F6V035 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ccdc149F6V035 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ccdc149F6V035 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc149F6V035 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc149F6V035 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc149F6V035 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.2□□□□□ -0.14
Ccdc149F6V035 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc149F6V035 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.2□□□□□ -0.14
Ccdc149F6V035 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.2□□□□□ -0.14
Ccdc149F6V035 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.2□□□□□ -0.14
Ccdc149F6V035 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.2□□□□□ -0.14
Ccdc149F6V035 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC14.2□□□□□ -0.14
Ccdc149F6V035 Gm27772-201ENSMUST00000184900 187 ntBASIC14.2□□□□□ -0.14
Ccdc149F6V035 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.2□□□□□ -0.14
Ccdc149F6V035 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.2□□□□□ -0.14
Ccdc149F6V035 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.2□□□□□ -0.14
Ccdc149F6V035 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.2□□□□□ -0.14
Ccdc149F6V035 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc149F6V035 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc149F6V035 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc149F6V035 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc149F6V035 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc149F6V035 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc149F6V035 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc149F6V035 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc149F6V035 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc149F6V035 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
Ccdc149F6V035 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc149F6V035 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.19□□□□□ -0.14
Ccdc149F6V035 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc149F6V035 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc149F6V035 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc149F6V035 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc149F6V035 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc149F6V035 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc149F6V035 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc149F6V035 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc149F6V035 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.19□□□□□ -0.14
Ccdc149F6V035 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc149F6V035 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ccdc149F6V035 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc149F6V035 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ccdc149F6V035 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.19□□□□□ -0.14
Ccdc149F6V035 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ccdc149F6V035 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ccdc149F6V035 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc149F6V035 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc149F6V035 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC14.19□□□□□ -0.14
Ccdc149F6V035 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ccdc149F6V035 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc149F6V035 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.19□□□□□ -0.14
Ccdc149F6V035 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.19□□□□□ -0.14
Ccdc149F6V035 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc149F6V035 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.19□□□□□ -0.14
Ccdc149F6V035 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.19□□□□□ -0.14
Ccdc149F6V035 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc149F6V035 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc149F6V035 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc149F6V035 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc149F6V035 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc149F6V035 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc149F6V035 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc149F6V035 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.19□□□□□ -0.14
Ccdc149F6V035 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc149F6V035 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc149F6V035 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc149F6V035 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc149F6V035 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc149F6V035 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms