Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb9E9Q5G2 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb9E9Q5G2 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb9E9Q5G2 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb9E9Q5G2 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Pcdhb9E9Q5G2 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb9E9Q5G2 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC16.47■□□□□ 0.23
Pcdhb9E9Q5G2 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb9E9Q5G2 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb9E9Q5G2 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Pcdhb9E9Q5G2 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb9E9Q5G2 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb9E9Q5G2 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb9E9Q5G2 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb9E9Q5G2 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
Pcdhb9E9Q5G2 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Pcdhb9E9Q5G2 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb9E9Q5G2 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb9E9Q5G2 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Pcdhb9E9Q5G2 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb9E9Q5G2 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Pcdhb9E9Q5G2 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb9E9Q5G2 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb9E9Q5G2 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb9E9Q5G2 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb9E9Q5G2 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Pcdhb9E9Q5G2 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb9E9Q5G2 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb9E9Q5G2 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb9E9Q5G2 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Pcdhb9E9Q5G2 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb9E9Q5G2 Gm38037-201ENSMUST00000192600 1624 ntBASIC16.46■□□□□ 0.23
Pcdhb9E9Q5G2 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb9E9Q5G2 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Pcdhb9E9Q5G2 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb9E9Q5G2 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb9E9Q5G2 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb9E9Q5G2 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC16.46■□□□□ 0.23
Pcdhb9E9Q5G2 Ldha-ps-201ENSMUST00000119390 995 ntBASIC16.46■□□□□ 0.23
Pcdhb9E9Q5G2 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC16.46■□□□□ 0.23
Pcdhb9E9Q5G2 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb9E9Q5G2 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb9E9Q5G2 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Pcdhb9E9Q5G2 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC16.46■□□□□ 0.23
Pcdhb9E9Q5G2 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC16.46■□□□□ 0.23
Pcdhb9E9Q5G2 AC166997.1-201ENSMUST00000225122 572 ntBASIC16.46■□□□□ 0.23
Pcdhb9E9Q5G2 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb9E9Q5G2 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb9E9Q5G2 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Pcdhb9E9Q5G2 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Pcdhb9E9Q5G2 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC16.46■□□□□ 0.23
Pcdhb9E9Q5G2 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb9E9Q5G2 Zkscan14-203ENSMUST00000198959 2243 ntBASIC16.46■□□□□ 0.23
Pcdhb9E9Q5G2 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb9E9Q5G2 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC16.46■□□□□ 0.23
Pcdhb9E9Q5G2 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb9E9Q5G2 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Pcdhb9E9Q5G2 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb9E9Q5G2 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Pcdhb9E9Q5G2 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
Pcdhb9E9Q5G2 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
Pcdhb9E9Q5G2 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC16.45■□□□□ 0.22
Pcdhb9E9Q5G2 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb9E9Q5G2 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb9E9Q5G2 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb9E9Q5G2 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb9E9Q5G2 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb9E9Q5G2 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb9E9Q5G2 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb9E9Q5G2 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb9E9Q5G2 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Pcdhb9E9Q5G2 Gm5354-201ENSMUST00000182417 973 ntBASIC16.45■□□□□ 0.22
Pcdhb9E9Q5G2 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb9E9Q5G2 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb9E9Q5G2 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Pcdhb9E9Q5G2 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb9E9Q5G2 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb9E9Q5G2 AC168058.1-201ENSMUST00000219521 2282 ntBASIC16.45■□□□□ 0.22
Pcdhb9E9Q5G2 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb9E9Q5G2 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb9E9Q5G2 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb9E9Q5G2 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Pcdhb9E9Q5G2 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb9E9Q5G2 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb9E9Q5G2 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb9E9Q5G2 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb9E9Q5G2 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb9E9Q5G2 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC16.44■□□□□ 0.22
Pcdhb9E9Q5G2 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb9E9Q5G2 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb9E9Q5G2 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb9E9Q5G2 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb9E9Q5G2 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb9E9Q5G2 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Pcdhb9E9Q5G2 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC16.44■□□□□ 0.22
Pcdhb9E9Q5G2 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb9E9Q5G2 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb9E9Q5G2 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC16.44■□□□□ 0.22
Pcdhb9E9Q5G2 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC16.44■□□□□ 0.22
Pcdhb9E9Q5G2 Gm2445-201ENSMUST00000182798 989 ntBASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms