Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a3E9PWQ3 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a3E9PWQ3 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a3E9PWQ3 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a3E9PWQ3 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a3E9PWQ3 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a3E9PWQ3 Gm13996-201ENSMUST00000118456 430 ntBASIC13.68□□□□□ -0.22
Col6a3E9PWQ3 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC13.68□□□□□ -0.22
Col6a3E9PWQ3 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a3E9PWQ3 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a3E9PWQ3 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a3E9PWQ3 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a3E9PWQ3 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a3E9PWQ3 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Col6a3E9PWQ3 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.68□□□□□ -0.22
Col6a3E9PWQ3 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a3E9PWQ3 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
Col6a3E9PWQ3 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13.68□□□□□ -0.22
Col6a3E9PWQ3 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.68□□□□□ -0.22
Col6a3E9PWQ3 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC13.68□□□□□ -0.22
Col6a3E9PWQ3 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a3E9PWQ3 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Col6a3E9PWQ3 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a3E9PWQ3 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a3E9PWQ3 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Col6a3E9PWQ3 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a3E9PWQ3 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a3E9PWQ3 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Col6a3E9PWQ3 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC13.68□□□□□ -0.22
Col6a3E9PWQ3 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a3E9PWQ3 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a3E9PWQ3 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a3E9PWQ3 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a3E9PWQ3 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Col6a3E9PWQ3 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a3E9PWQ3 Gm14350-201ENSMUST00000116642 640 ntBASIC13.68□□□□□ -0.22
Col6a3E9PWQ3 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.68□□□□□ -0.22
Col6a3E9PWQ3 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a3E9PWQ3 Gm26956-201ENSMUST00000182176 986 ntBASIC13.68□□□□□ -0.22
Col6a3E9PWQ3 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC13.68□□□□□ -0.22
Col6a3E9PWQ3 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC13.68□□□□□ -0.22
Col6a3E9PWQ3 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC13.68□□□□□ -0.22
Col6a3E9PWQ3 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a3E9PWQ3 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Col6a3E9PWQ3 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Col6a3E9PWQ3 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a3E9PWQ3 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC13.67□□□□□ -0.22
Col6a3E9PWQ3 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Col6a3E9PWQ3 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a3E9PWQ3 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a3E9PWQ3 Gm12899-201ENSMUST00000120565 551 ntBASIC13.67□□□□□ -0.22
Col6a3E9PWQ3 Mir1901-201ENSMUST00000122616 78 ntBASIC13.67□□□□□ -0.22
Col6a3E9PWQ3 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC13.67□□□□□ -0.22
Col6a3E9PWQ3 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC13.67□□□□□ -0.22
Col6a3E9PWQ3 Gm14005-208ENSMUST00000223654 681 ntBASIC13.67□□□□□ -0.22
Col6a3E9PWQ3 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a3E9PWQ3 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a3E9PWQ3 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a3E9PWQ3 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a3E9PWQ3 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.67□□□□□ -0.22
Col6a3E9PWQ3 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a3E9PWQ3 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a3E9PWQ3 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a3E9PWQ3 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a3E9PWQ3 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a3E9PWQ3 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC13.67□□□□□ -0.22
Col6a3E9PWQ3 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC13.67□□□□□ -0.22
Col6a3E9PWQ3 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.67□□□□□ -0.22
Col6a3E9PWQ3 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.67□□□□□ -0.22
Col6a3E9PWQ3 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.67□□□□□ -0.22
Col6a3E9PWQ3 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.67□□□□□ -0.22
Col6a3E9PWQ3 Gm9873-201ENSMUST00000063891 1097 ntBASIC13.67□□□□□ -0.22
Col6a3E9PWQ3 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a3E9PWQ3 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a3E9PWQ3 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a3E9PWQ3 Gm3765-201ENSMUST00000130985 1447 ntBASIC13.67□□□□□ -0.22
Col6a3E9PWQ3 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a3E9PWQ3 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC13.66□□□□□ -0.22
Col6a3E9PWQ3 Gm12882-201ENSMUST00000121696 517 ntBASIC13.66□□□□□ -0.22
Col6a3E9PWQ3 Gm27046-201ENSMUST00000182160 463 ntBASIC13.66□□□□□ -0.22
Col6a3E9PWQ3 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Col6a3E9PWQ3 Gm5781-201ENSMUST00000219792 443 ntBASIC13.66□□□□□ -0.22
Col6a3E9PWQ3 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a3E9PWQ3 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a3E9PWQ3 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.66□□□□□ -0.22
Col6a3E9PWQ3 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Col6a3E9PWQ3 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.66□□□□□ -0.22
Col6a3E9PWQ3 Gm5434-202ENSMUST00000222384 1451 ntBASIC13.66□□□□□ -0.22
Col6a3E9PWQ3 Gm5434-201ENSMUST00000071825 1451 ntBASIC13.66□□□□□ -0.22
Col6a3E9PWQ3 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a3E9PWQ3 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a3E9PWQ3 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.66□□□□□ -0.22
Col6a3E9PWQ3 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.66□□□□□ -0.22
Col6a3E9PWQ3 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC13.66□□□□□ -0.22
Col6a3E9PWQ3 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a3E9PWQ3 Gm19963-201ENSMUST00000208413 1255 ntBASIC13.66□□□□□ -0.22
Col6a3E9PWQ3 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a3E9PWQ3 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Col6a3E9PWQ3 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a3E9PWQ3 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms