Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd6A3KFM7 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC11.22□□□□□ -0.61
Chd6A3KFM7 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chd6A3KFM7 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd6A3KFM7 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC11.22□□□□□ -0.61
Chd6A3KFM7 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC11.22□□□□□ -0.61
Chd6A3KFM7 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Chd6A3KFM7 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chd6A3KFM7 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Chd6A3KFM7 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd6A3KFM7 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
Chd6A3KFM7 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
Chd6A3KFM7 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chd6A3KFM7 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC11.22□□□□□ -0.61
Chd6A3KFM7 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.22□□□□□ -0.61
Chd6A3KFM7 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC11.22□□□□□ -0.61
Chd6A3KFM7 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Chd6A3KFM7 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chd6A3KFM7 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd6A3KFM7 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd6A3KFM7 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Chd6A3KFM7 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd6A3KFM7 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd6A3KFM7 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chd6A3KFM7 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chd6A3KFM7 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd6A3KFM7 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chd6A3KFM7 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd6A3KFM7 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd6A3KFM7 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd6A3KFM7 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chd6A3KFM7 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd6A3KFM7 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chd6A3KFM7 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.22□□□□□ -0.61
Chd6A3KFM7 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.22□□□□□ -0.61
Chd6A3KFM7 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.22□□□□□ -0.61
Chd6A3KFM7 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Chd6A3KFM7 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chd6A3KFM7 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC11.22□□□□□ -0.61
Chd6A3KFM7 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chd6A3KFM7 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.22□□□□□ -0.61
Chd6A3KFM7 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd6A3KFM7 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chd6A3KFM7 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd6A3KFM7 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd6A3KFM7 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd6A3KFM7 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chd6A3KFM7 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chd6A3KFM7 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chd6A3KFM7 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chd6A3KFM7 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC11.21□□□□□ -0.61
Chd6A3KFM7 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Chd6A3KFM7 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
Chd6A3KFM7 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chd6A3KFM7 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC11.21□□□□□ -0.61
Chd6A3KFM7 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chd6A3KFM7 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Chd6A3KFM7 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Chd6A3KFM7 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chd6A3KFM7 Gm11801-201ENSMUST00000117807 746 ntBASIC11.21□□□□□ -0.61
Chd6A3KFM7 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.21□□□□□ -0.61
Chd6A3KFM7 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Chd6A3KFM7 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC11.21□□□□□ -0.61
Chd6A3KFM7 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Chd6A3KFM7 Gm9873-201ENSMUST00000063891 1097 ntBASIC11.21□□□□□ -0.61
Chd6A3KFM7 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chd6A3KFM7 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Chd6A3KFM7 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Chd6A3KFM7 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Chd6A3KFM7 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Chd6A3KFM7 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Chd6A3KFM7 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.21□□□□□ -0.62
Chd6A3KFM7 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.21□□□□□ -0.62
Chd6A3KFM7 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Chd6A3KFM7 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Chd6A3KFM7 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Chd6A3KFM7 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Chd6A3KFM7 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Chd6A3KFM7 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Chd6A3KFM7 Gm14460-201ENSMUST00000121511 639 ntBASIC11.21□□□□□ -0.62
Chd6A3KFM7 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC11.21□□□□□ -0.62
Chd6A3KFM7 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC11.21□□□□□ -0.62
Chd6A3KFM7 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Chd6A3KFM7 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Chd6A3KFM7 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Chd6A3KFM7 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC11.2□□□□□ -0.62
Chd6A3KFM7 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd6A3KFM7 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Chd6A3KFM7 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd6A3KFM7 Gm27528-202ENSMUST00000222916 2012 ntBASIC11.2□□□□□ -0.62
Chd6A3KFM7 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd6A3KFM7 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Chd6A3KFM7 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC11.2□□□□□ -0.62
Chd6A3KFM7 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd6A3KFM7 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.2□□□□□ -0.62
Chd6A3KFM7 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Chd6A3KFM7 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11.2□□□□□ -0.62
Chd6A3KFM7 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd6A3KFM7 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd6A3KFM7 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms