Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a4A2AX52 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a4A2AX52 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a4A2AX52 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a4A2AX52 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a4A2AX52 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Col6a4A2AX52 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC11.83□□□□□ -0.52
Col6a4A2AX52 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a4A2AX52 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a4A2AX52 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a4A2AX52 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a4A2AX52 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a4A2AX52 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a4A2AX52 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a4A2AX52 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
Col6a4A2AX52 Gm11814-201ENSMUST00000119515 929 ntBASIC11.82□□□□□ -0.52
Col6a4A2AX52 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a4A2AX52 Gm22331-201ENSMUST00000158066 136 ntBASIC11.82□□□□□ -0.52
Col6a4A2AX52 Gm27839-201ENSMUST00000184242 106 ntBASIC11.82□□□□□ -0.52
Col6a4A2AX52 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.82□□□□□ -0.52
Col6a4A2AX52 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.82□□□□□ -0.52
Col6a4A2AX52 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC11.82□□□□□ -0.52
Col6a4A2AX52 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a4A2AX52 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a4A2AX52 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.82□□□□□ -0.52
Col6a4A2AX52 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a4A2AX52 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a4A2AX52 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a4A2AX52 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a4A2AX52 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Col6a4A2AX52 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.82□□□□□ -0.52
Col6a4A2AX52 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a4A2AX52 Mxra8os-201ENSMUST00000097740 687 ntBASIC11.82□□□□□ -0.52
Col6a4A2AX52 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a4A2AX52 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a4A2AX52 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.82□□□□□ -0.52
Col6a4A2AX52 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Col6a4A2AX52 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a4A2AX52 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC11.82□□□□□ -0.52
Col6a4A2AX52 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a4A2AX52 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
Col6a4A2AX52 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Col6a4A2AX52 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Col6a4A2AX52 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a4A2AX52 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.81□□□□□ -0.52
Col6a4A2AX52 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a4A2AX52 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a4A2AX52 BC037039-201ENSMUST00000192003 2205 ntBASIC11.81□□□□□ -0.52
Col6a4A2AX52 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a4A2AX52 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a4A2AX52 Gm13689-201ENSMUST00000119360 685 ntBASIC11.81□□□□□ -0.52
Col6a4A2AX52 Gm15376-201ENSMUST00000122258 783 ntBASIC11.81□□□□□ -0.52
Col6a4A2AX52 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC11.81□□□□□ -0.52
Col6a4A2AX52 Gm27243-201ENSMUST00000183964 521 ntBASIC11.81□□□□□ -0.52
Col6a4A2AX52 Gm5370-201ENSMUST00000187187 574 ntBASIC11.81□□□□□ -0.52
Col6a4A2AX52 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.81□□□□□ -0.52
Col6a4A2AX52 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a4A2AX52 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a4A2AX52 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a4A2AX52 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a4A2AX52 Carlr-201ENSMUST00000181515 2574 ntBASIC11.81□□□□□ -0.52
Col6a4A2AX52 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a4A2AX52 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a4A2AX52 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a4A2AX52 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a4A2AX52 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Col6a4A2AX52 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a4A2AX52 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
Col6a4A2AX52 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a4A2AX52 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a4A2AX52 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a4A2AX52 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a4A2AX52 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a4A2AX52 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a4A2AX52 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a4A2AX52 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.81□□□□□ -0.52
Col6a4A2AX52 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.81□□□□□ -0.52
Col6a4A2AX52 Gm27501-201ENSMUST00000183599 107 ntBASIC11.81□□□□□ -0.52
Col6a4A2AX52 Gm5276-201ENSMUST00000196683 1047 ntBASIC11.81□□□□□ -0.52
Col6a4A2AX52 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a4A2AX52 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC11.81□□□□□ -0.52
Col6a4A2AX52 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Col6a4A2AX52 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a4A2AX52 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a4A2AX52 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a4A2AX52 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a4A2AX52 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a4A2AX52 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a4A2AX52 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Col6a4A2AX52 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a4A2AX52 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.8□□□□□ -0.52
Col6a4A2AX52 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a4A2AX52 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.8□□□□□ -0.52
Col6a4A2AX52 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a4A2AX52 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC11.8□□□□□ -0.52
Col6a4A2AX52 Gm15429-201ENSMUST00000151268 798 ntBASIC11.8□□□□□ -0.52
Col6a4A2AX52 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Col6a4A2AX52 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.8□□□□□ -0.52
Col6a4A2AX52 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11.8□□□□□ -0.52
Col6a4A2AX52 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms