Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 CT485607.1-201ENSMUST00000216100 85 ntBASIC7.21□□□□□ -1.26
Ubr4A2AN08 AC154290.1-201ENSMUST00000223786 1240 ntBASIC7.21□□□□□ -1.26
Ubr4A2AN08 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Ubr4A2AN08 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.26
Ubr4A2AN08 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.26
Ubr4A2AN08 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Ubr4A2AN08 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Ubr4A2AN08 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Ubr4A2AN08 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC7.21□□□□□ -1.26
Ubr4A2AN08 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Ubr4A2AN08 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Ubr4A2AN08 Gm43908-201ENSMUST00000205074 1472 ntBASIC7.21□□□□□ -1.26
Ubr4A2AN08 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.26
Ubr4A2AN08 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.26
Ubr4A2AN08 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Ubr4A2AN08 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Ubr4A2AN08 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC7.21□□□□□ -1.26
Ubr4A2AN08 Gm12899-201ENSMUST00000120565 551 ntBASIC7.21□□□□□ -1.26
Ubr4A2AN08 Gm15432-201ENSMUST00000121106 195 ntBASIC7.21□□□□□ -1.26
Ubr4A2AN08 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Ubr4A2AN08 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Ubr4A2AN08 Gm5205-201ENSMUST00000182253 1003 ntBASIC7.21□□□□□ -1.26
Ubr4A2AN08 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC7.21□□□□□ -1.26
Ubr4A2AN08 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Ubr4A2AN08 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Ubr4A2AN08 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Ubr4A2AN08 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Ubr4A2AN08 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Ubr4A2AN08 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Ubr4A2AN08 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC7.21□□□□□ -1.26
Ubr4A2AN08 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Ubr4A2AN08 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC7.2□□□□□ -1.26
Ubr4A2AN08 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ubr4A2AN08 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ubr4A2AN08 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ubr4A2AN08 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ubr4A2AN08 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC7.2□□□□□ -1.26
Ubr4A2AN08 Gm15881-201ENSMUST00000148792 942 ntBASIC7.2□□□□□ -1.26
Ubr4A2AN08 Gm9081-201ENSMUST00000182346 991 ntBASIC7.2□□□□□ -1.26
Ubr4A2AN08 Gm9022-201ENSMUST00000182482 992 ntBASIC7.2□□□□□ -1.26
Ubr4A2AN08 Gm2546-201ENSMUST00000182630 991 ntBASIC7.2□□□□□ -1.26
Ubr4A2AN08 Gm4654-201ENSMUST00000183305 982 ntBASIC7.2□□□□□ -1.26
Ubr4A2AN08 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC7.2□□□□□ -1.26
Ubr4A2AN08 Gm5896-201ENSMUST00000189662 1024 ntBASIC7.2□□□□□ -1.26
Ubr4A2AN08 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Ubr4A2AN08 Gm8342-201ENSMUST00000209839 757 ntBASIC7.2□□□□□ -1.26
Ubr4A2AN08 AC159205.5-202ENSMUST00000224849 386 ntBASIC7.2□□□□□ -1.26
Ubr4A2AN08 Gm5507-201ENSMUST00000091897 1008 ntBASIC7.2□□□□□ -1.26
Ubr4A2AN08 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Ubr4A2AN08 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ubr4A2AN08 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ubr4A2AN08 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ubr4A2AN08 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ubr4A2AN08 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Ubr4A2AN08 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ubr4A2AN08 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Ubr4A2AN08 Gm18244-201ENSMUST00000219747 1566 ntBASIC7.2□□□□□ -1.26
Ubr4A2AN08 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ubr4A2AN08 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ubr4A2AN08 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ubr4A2AN08 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ubr4A2AN08 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ubr4A2AN08 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC7.2□□□□□ -1.26
Ubr4A2AN08 Gm44405-201ENSMUST00000198952 126 ntBASIC7.2□□□□□ -1.26
Ubr4A2AN08 AC118639.2-201ENSMUST00000226289 223 ntBASIC7.2□□□□□ -1.26
Ubr4A2AN08 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ubr4A2AN08 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Ubr4A2AN08 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ubr4A2AN08 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Ubr4A2AN08 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ubr4A2AN08 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ubr4A2AN08 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ubr4A2AN08 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
Ubr4A2AN08 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ubr4A2AN08 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ubr4A2AN08 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC7.2□□□□□ -1.26
Ubr4A2AN08 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
Ubr4A2AN08 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ubr4A2AN08 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ubr4A2AN08 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ubr4A2AN08 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ubr4A2AN08 Gm20628-201ENSMUST00000177363 3215 ntBASIC7.2□□□□□ -1.26
Ubr4A2AN08 Gm13996-201ENSMUST00000118456 430 ntBASIC7.2□□□□□ -1.26
Ubr4A2AN08 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ubr4A2AN08 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC7.2□□□□□ -1.26
Ubr4A2AN08 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ubr4A2AN08 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ubr4A2AN08 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ubr4A2AN08 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC7.2□□□□□ -1.26
Ubr4A2AN08 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ubr4A2AN08 Gm19439-201ENSMUST00000198195 2273 ntBASIC7.2□□□□□ -1.26
Ubr4A2AN08 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ubr4A2AN08 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ubr4A2AN08 Gm6598-201ENSMUST00000202719 2615 ntBASIC7.2□□□□□ -1.26
Ubr4A2AN08 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC7.2□□□□□ -1.26
Ubr4A2AN08 Gm15515-201ENSMUST00000117827 822 ntBASIC7.2□□□□□ -1.26
Ubr4A2AN08 Gm15711-201ENSMUST00000118889 535 ntBASIC7.2□□□□□ -1.26
Ubr4A2AN08 Gm13624-201ENSMUST00000120263 462 ntBASIC7.2□□□□□ -1.26
Ubr4A2AN08 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC7.2□□□□□ -1.26
Ubr4A2AN08 C130080G10Rik-204ENSMUST00000155185 954 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms