Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav12-1A0N8R1 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav12-1A0N8R1 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav12-1A0N8R1 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Trav12-1A0N8R1 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav12-1A0N8R1 AC139054.1-201ENSMUST00000226898 1598 ntBASIC11.71□□□□□ -0.54
Trav12-1A0N8R1 Gm14752-201ENSMUST00000120719 2075 ntBASIC11.71□□□□□ -0.54
Trav12-1A0N8R1 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav12-1A0N8R1 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Trav12-1A0N8R1 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav12-1A0N8R1 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Gm42466-201ENSMUST00000202099 1301 ntBASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Gm25925-201ENSMUST00000158314 306 ntBASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Gm29310-201ENSMUST00000185468 696 ntBASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Gm21825-201ENSMUST00000185728 696 ntBASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Gm29109-201ENSMUST00000185895 696 ntBASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Gm21896-201ENSMUST00000186520 696 ntBASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Gm21873-201ENSMUST00000186728 696 ntBASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Gm21794-201ENSMUST00000187056 696 ntBASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Gm21880-201ENSMUST00000187275 696 ntBASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Gm21826-201ENSMUST00000187451 696 ntBASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Gm21198-201ENSMUST00000188393 696 ntBASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Gm21749-201ENSMUST00000189343 696 ntBASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Gm21901-201ENSMUST00000189568 696 ntBASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Gm29424-201ENSMUST00000189716 696 ntBASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Gm28599-201ENSMUST00000189838 694 ntBASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Gm21867-201ENSMUST00000189917 696 ntBASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Gm29269-201ENSMUST00000190087 696 ntBASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Gm21722-201ENSMUST00000190153 696 ntBASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Gm28423-201ENSMUST00000190701 696 ntBASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Gm21899-201ENSMUST00000190745 696 ntBASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Gm21910-201ENSMUST00000191163 696 ntBASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Gm21849-201ENSMUST00000191571 696 ntBASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Gm28678-201ENSMUST00000191593 696 ntBASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Gm20910-201ENSMUST00000193268 696 ntBASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Gm21871-201ENSMUST00000194621 696 ntBASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Ighv8-14-201ENSMUST00000196781 358 ntBASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 AC166341.4-201ENSMUST00000220625 123 ntBASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12-1A0N8R1 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12-1A0N8R1 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav12-1A0N8R1 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12-1A0N8R1 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav12-1A0N8R1 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav12-1A0N8R1 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav12-1A0N8R1 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12-1A0N8R1 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12-1A0N8R1 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12-1A0N8R1 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12-1A0N8R1 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12-1A0N8R1 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC11.69□□□□□ -0.54
Trav12-1A0N8R1 Gm11025-201ENSMUST00000140773 466 ntBASIC11.69□□□□□ -0.54
Trav12-1A0N8R1 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12-1A0N8R1 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC11.69□□□□□ -0.54
Trav12-1A0N8R1 Ighv8-7-201ENSMUST00000194349 297 ntBASIC11.69□□□□□ -0.54
Trav12-1A0N8R1 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav12-1A0N8R1 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12-1A0N8R1 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12-1A0N8R1 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12-1A0N8R1 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12-1A0N8R1 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Trav12-1A0N8R1 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms