Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Ccdc194A0A140LIT1 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc194A0A140LIT1 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc194A0A140LIT1 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.96□□□□□ -0.18
Ccdc194A0A140LIT1 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
Ccdc194A0A140LIT1 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc194A0A140LIT1 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Ccdc194A0A140LIT1 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc194A0A140LIT1 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc194A0A140LIT1 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc194A0A140LIT1 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.95□□□□□ -0.18
Ccdc194A0A140LIT1 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc194A0A140LIT1 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Ccdc194A0A140LIT1 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc194A0A140LIT1 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc194A0A140LIT1 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc194A0A140LIT1 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc194A0A140LIT1 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc194A0A140LIT1 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc194A0A140LIT1 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc194A0A140LIT1 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc194A0A140LIT1 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Ccdc194A0A140LIT1 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc194A0A140LIT1 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc194A0A140LIT1 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.95□□□□□ -0.18
Ccdc194A0A140LIT1 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Ccdc194A0A140LIT1 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.95□□□□□ -0.18
Ccdc194A0A140LIT1 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.95□□□□□ -0.18
Ccdc194A0A140LIT1 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.95□□□□□ -0.18
Ccdc194A0A140LIT1 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.95□□□□□ -0.18
Ccdc194A0A140LIT1 Gm15957-201ENSMUST00000118893 974 ntBASIC13.95□□□□□ -0.18
Ccdc194A0A140LIT1 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc194A0A140LIT1 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc194A0A140LIT1 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.95□□□□□ -0.18
Ccdc194A0A140LIT1 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.95□□□□□ -0.18
Ccdc194A0A140LIT1 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.95□□□□□ -0.18
Ccdc194A0A140LIT1 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.95□□□□□ -0.18
Ccdc194A0A140LIT1 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.95□□□□□ -0.18
Ccdc194A0A140LIT1 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc194A0A140LIT1 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Ccdc194A0A140LIT1 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc194A0A140LIT1 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc194A0A140LIT1 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc194A0A140LIT1 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc194A0A140LIT1 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc194A0A140LIT1 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.95□□□□□ -0.18
Ccdc194A0A140LIT1 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc194A0A140LIT1 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc194A0A140LIT1 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Ccdc194A0A140LIT1 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc194A0A140LIT1 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc194A0A140LIT1 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc194A0A140LIT1 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Ccdc194A0A140LIT1 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc194A0A140LIT1 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.95□□□□□ -0.18
Ccdc194A0A140LIT1 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc194A0A140LIT1 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.94□□□□□ -0.18
Ccdc194A0A140LIT1 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc194A0A140LIT1 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc194A0A140LIT1 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc194A0A140LIT1 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc194A0A140LIT1 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc194A0A140LIT1 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc194A0A140LIT1 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Ccdc194A0A140LIT1 Gm11745-201ENSMUST00000121669 448 ntBASIC13.94□□□□□ -0.18
Ccdc194A0A140LIT1 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc194A0A140LIT1 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc194A0A140LIT1 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc194A0A140LIT1 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc194A0A140LIT1 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.94□□□□□ -0.18
Ccdc194A0A140LIT1 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc194A0A140LIT1 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc194A0A140LIT1 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.94□□□□□ -0.18
Ccdc194A0A140LIT1 Gm44608-201ENSMUST00000206827 855 ntBASIC13.94□□□□□ -0.18
Ccdc194A0A140LIT1 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.94□□□□□ -0.18
Ccdc194A0A140LIT1 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc194A0A140LIT1 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc194A0A140LIT1 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc194A0A140LIT1 Gm10175-201ENSMUST00000086013 645 ntBASIC13.94□□□□□ -0.18
Ccdc194A0A140LIT1 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc194A0A140LIT1 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc194A0A140LIT1 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.94□□□□□ -0.18
Ccdc194A0A140LIT1 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc194A0A140LIT1 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.94□□□□□ -0.18
Ccdc194A0A140LIT1 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.94□□□□□ -0.18
Ccdc194A0A140LIT1 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc194A0A140LIT1 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc194A0A140LIT1 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Ccdc194A0A140LIT1 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc194A0A140LIT1 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc194A0A140LIT1 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.94□□□□□ -0.18
Ccdc194A0A140LIT1 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc194A0A140LIT1 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc194A0A140LIT1 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc194A0A140LIT1 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Ccdc194A0A140LIT1 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Ccdc194A0A140LIT1 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc194A0A140LIT1 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
Ccdc194A0A140LIT1 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc194A0A140LIT1 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms