Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3n-3A0A0G2JEM0 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3n-3A0A0G2JEM0 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC10.63□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Gm3928-201ENSMUST00000121141 1307 ntBASIC10.63□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC10.63□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC10.63□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3n-3A0A0G2JEM0 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC10.63□□□□□ -0.71
Trav3n-3A0A0G2JEM0 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC10.63□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC10.63□□□□□ -0.71
Trav3n-3A0A0G2JEM0 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC10.63□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Gm43463-201ENSMUST00000195967 1803 ntBASIC10.63□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC10.62□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC10.62□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC10.62□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC10.62□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC10.62□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Gm11764-201ENSMUST00000120221 623 ntBASIC10.62□□□□□ -0.71
Trav3n-3A0A0G2JEM0 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC10.62□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Gm5253-201ENSMUST00000187104 1025 ntBASIC10.62□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC10.62□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Gm9682-201ENSMUST00000197505 556 ntBASIC10.62□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Gm18669-201ENSMUST00000216049 778 ntBASIC10.62□□□□□ -0.71
Trav3n-3A0A0G2JEM0 AC154595.3-201ENSMUST00000224579 384 ntBASIC10.62□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC10.62□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Gm45011-201ENSMUST00000207620 2297 ntBASIC10.61□□□□□ -0.71
Trav3n-3A0A0G2JEM0 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms