Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav6n-6A0A075B6B2 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Trav6n-6A0A075B6B2 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav6n-6A0A075B6B2 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav6n-6A0A075B6B2 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav6n-6A0A075B6B2 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav6n-6A0A075B6B2 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav6n-6A0A075B6B2 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav6n-6A0A075B6B2 Gm45743-201ENSMUST00000212701 2795 ntBASIC10.48□□□□□ -0.73
Trav6n-6A0A075B6B2 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Trav6n-6A0A075B6B2 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav6n-6A0A075B6B2 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav6n-6A0A075B6B2 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav6n-6A0A075B6B2 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav6n-6A0A075B6B2 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav6n-6A0A075B6B2 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav6n-6A0A075B6B2 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav6n-6A0A075B6B2 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Trav6n-6A0A075B6B2 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Trav6n-6A0A075B6B2 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC10.48□□□□□ -0.73
Trav6n-6A0A075B6B2 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav6n-6A0A075B6B2 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav6n-6A0A075B6B2 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav6n-6A0A075B6B2 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav6n-6A0A075B6B2 AC164702.1-201ENSMUST00000220135 2212 ntBASIC10.48□□□□□ -0.73
Trav6n-6A0A075B6B2 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav6n-6A0A075B6B2 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav6n-6A0A075B6B2 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC10.48□□□□□ -0.73
Trav6n-6A0A075B6B2 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav6n-6A0A075B6B2 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav6n-6A0A075B6B2 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC10.48□□□□□ -0.73
Trav6n-6A0A075B6B2 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav6n-6A0A075B6B2 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC10.48□□□□□ -0.73
Trav6n-6A0A075B6B2 Gm12260-201ENSMUST00000122447 411 ntBASIC10.48□□□□□ -0.73
Trav6n-6A0A075B6B2 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC10.48□□□□□ -0.73
Trav6n-6A0A075B6B2 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Trav6n-6A0A075B6B2 Gm27300-201ENSMUST00000184085 97 ntBASIC10.48□□□□□ -0.73
Trav6n-6A0A075B6B2 Gm27335-201ENSMUST00000184758 97 ntBASIC10.48□□□□□ -0.73
Trav6n-6A0A075B6B2 Mir8117-201ENSMUST00000184773 107 ntBASIC10.48□□□□□ -0.73
Trav6n-6A0A075B6B2 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav6n-6A0A075B6B2 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav6n-6A0A075B6B2 AC147366.1-201ENSMUST00000227671 852 ntBASIC10.48□□□□□ -0.73
Trav6n-6A0A075B6B2 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav6n-6A0A075B6B2 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Trav6n-6A0A075B6B2 Gm4081-201ENSMUST00000195287 1838 ntBASIC10.48□□□□□ -0.73
Trav6n-6A0A075B6B2 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav6n-6A0A075B6B2 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav6n-6A0A075B6B2 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav6n-6A0A075B6B2 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav6n-6A0A075B6B2 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav6n-6A0A075B6B2 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav6n-6A0A075B6B2 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav6n-6A0A075B6B2 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav6n-6A0A075B6B2 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Trav6n-6A0A075B6B2 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav6n-6A0A075B6B2 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav6n-6A0A075B6B2 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav6n-6A0A075B6B2 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav6n-6A0A075B6B2 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav6n-6A0A075B6B2 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav6n-6A0A075B6B2 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 AC154262.2-201ENSMUST00000224310 2293 ntBASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 Gm8000-201ENSMUST00000188378 592 ntBASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC10.47□□□□□ -0.73
Trav6n-6A0A075B6B2 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms