Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC17.48■□□□□ 0.39
Hdac6Q9Z2V5 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hdac6Q9Z2V5 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Hdac6Q9Z2V5 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hdac6Q9Z2V5 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hdac6Q9Z2V5 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hdac6Q9Z2V5 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC17.48■□□□□ 0.39
Hdac6Q9Z2V5 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hdac6Q9Z2V5 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hdac6Q9Z2V5 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hdac6Q9Z2V5 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hdac6Q9Z2V5 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hdac6Q9Z2V5 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hdac6Q9Z2V5 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hdac6Q9Z2V5 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hdac6Q9Z2V5 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hdac6Q9Z2V5 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Hdac6Q9Z2V5 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hdac6Q9Z2V5 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hdac6Q9Z2V5 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hdac6Q9Z2V5 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC17.47■□□□□ 0.39
Hdac6Q9Z2V5 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hdac6Q9Z2V5 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hdac6Q9Z2V5 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hdac6Q9Z2V5 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hdac6Q9Z2V5 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Hdac6Q9Z2V5 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hdac6Q9Z2V5 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hdac6Q9Z2V5 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hdac6Q9Z2V5 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hdac6Q9Z2V5 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.47■□□□□ 0.39
Hdac6Q9Z2V5 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hdac6Q9Z2V5 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hdac6Q9Z2V5 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC17.47■□□□□ 0.39
Hdac6Q9Z2V5 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hdac6Q9Z2V5 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Hdac6Q9Z2V5 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Hdac6Q9Z2V5 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.39
Hdac6Q9Z2V5 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Hdac6Q9Z2V5 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hdac6Q9Z2V5 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hdac6Q9Z2V5 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hdac6Q9Z2V5 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Hdac6Q9Z2V5 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hdac6Q9Z2V5 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hdac6Q9Z2V5 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Hdac6Q9Z2V5 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hdac6Q9Z2V5 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC17.46■□□□□ 0.39
Hdac6Q9Z2V5 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Hdac6Q9Z2V5 Gm43118-201ENSMUST00000199149 775 ntBASIC17.46■□□□□ 0.39
Hdac6Q9Z2V5 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC17.46■□□□□ 0.39
Hdac6Q9Z2V5 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC17.46■□□□□ 0.39
Hdac6Q9Z2V5 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hdac6Q9Z2V5 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hdac6Q9Z2V5 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hdac6Q9Z2V5 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hdac6Q9Z2V5 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Hdac6Q9Z2V5 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC17.46■□□□□ 0.39
Hdac6Q9Z2V5 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
Hdac6Q9Z2V5 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hdac6Q9Z2V5 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hdac6Q9Z2V5 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Hdac6Q9Z2V5 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hdac6Q9Z2V5 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Hdac6Q9Z2V5 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Hdac6Q9Z2V5 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC17.45■□□□□ 0.38
Hdac6Q9Z2V5 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac6Q9Z2V5 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac6Q9Z2V5 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac6Q9Z2V5 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac6Q9Z2V5 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac6Q9Z2V5 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac6Q9Z2V5 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac6Q9Z2V5 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac6Q9Z2V5 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac6Q9Z2V5 Gm37411-201ENSMUST00000194180 2282 ntBASIC17.45■□□□□ 0.38
Hdac6Q9Z2V5 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Hdac6Q9Z2V5 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.45■□□□□ 0.38
Hdac6Q9Z2V5 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Hdac6Q9Z2V5 Gm27501-201ENSMUST00000183599 107 ntBASIC17.45■□□□□ 0.38
Hdac6Q9Z2V5 Gm27516-201ENSMUST00000184237 98 ntBASIC17.45■□□□□ 0.38
Hdac6Q9Z2V5 Gm37008-201ENSMUST00000195712 319 ntBASIC17.45■□□□□ 0.38
Hdac6Q9Z2V5 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac6Q9Z2V5 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Hdac6Q9Z2V5 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Hdac6Q9Z2V5 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac6Q9Z2V5 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC17.45■□□□□ 0.38
Hdac6Q9Z2V5 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac6Q9Z2V5 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac6Q9Z2V5 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac6Q9Z2V5 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
Hdac6Q9Z2V5 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac6Q9Z2V5 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac6Q9Z2V5 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
Hdac6Q9Z2V5 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac6Q9Z2V5 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac6Q9Z2V5 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac6Q9Z2V5 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac6Q9Z2V5 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac6Q9Z2V5 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms