Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.04□□□□□ -0.16
Scn8aQ9WTU3 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scn8aQ9WTU3 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
Scn8aQ9WTU3 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scn8aQ9WTU3 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scn8aQ9WTU3 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scn8aQ9WTU3 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Scn8aQ9WTU3 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn8aQ9WTU3 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn8aQ9WTU3 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.04□□□□□ -0.16
Scn8aQ9WTU3 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn8aQ9WTU3 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
Scn8aQ9WTU3 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scn8aQ9WTU3 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.04□□□□□ -0.16
Scn8aQ9WTU3 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC14.04□□□□□ -0.16
Scn8aQ9WTU3 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn8aQ9WTU3 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn8aQ9WTU3 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn8aQ9WTU3 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn8aQ9WTU3 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.04□□□□□ -0.16
Scn8aQ9WTU3 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn8aQ9WTU3 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scn8aQ9WTU3 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn8aQ9WTU3 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scn8aQ9WTU3 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn8aQ9WTU3 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn8aQ9WTU3 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn8aQ9WTU3 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn8aQ9WTU3 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn8aQ9WTU3 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn8aQ9WTU3 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn8aQ9WTU3 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scn8aQ9WTU3 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn8aQ9WTU3 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.03□□□□□ -0.16
Scn8aQ9WTU3 Gm44719-201ENSMUST00000206404 149 ntBASIC14.03□□□□□ -0.16
Scn8aQ9WTU3 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.03□□□□□ -0.16
Scn8aQ9WTU3 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.03□□□□□ -0.16
Scn8aQ9WTU3 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn8aQ9WTU3 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn8aQ9WTU3 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn8aQ9WTU3 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn8aQ9WTU3 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scn8aQ9WTU3 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn8aQ9WTU3 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn8aQ9WTU3 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Scn8aQ9WTU3 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Scn8aQ9WTU3 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scn8aQ9WTU3 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn8aQ9WTU3 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn8aQ9WTU3 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn8aQ9WTU3 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.03□□□□□ -0.16
Scn8aQ9WTU3 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn8aQ9WTU3 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scn8aQ9WTU3 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn8aQ9WTU3 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scn8aQ9WTU3 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn8aQ9WTU3 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.03□□□□□ -0.16
Scn8aQ9WTU3 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn8aQ9WTU3 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.03□□□□□ -0.16
Scn8aQ9WTU3 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn8aQ9WTU3 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Scn8aQ9WTU3 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Scn8aQ9WTU3 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.03□□□□□ -0.16
Scn8aQ9WTU3 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn8aQ9WTU3 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.03□□□□□ -0.16
Scn8aQ9WTU3 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scn8aQ9WTU3 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Scn8aQ9WTU3 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn8aQ9WTU3 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn8aQ9WTU3 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn8aQ9WTU3 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn8aQ9WTU3 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn8aQ9WTU3 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn8aQ9WTU3 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Scn8aQ9WTU3 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scn8aQ9WTU3 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scn8aQ9WTU3 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scn8aQ9WTU3 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Scn8aQ9WTU3 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.02□□□□□ -0.16
Scn8aQ9WTU3 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scn8aQ9WTU3 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scn8aQ9WTU3 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scn8aQ9WTU3 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Scn8aQ9WTU3 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC14.02□□□□□ -0.16
Scn8aQ9WTU3 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
Scn8aQ9WTU3 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.02□□□□□ -0.16
Scn8aQ9WTU3 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scn8aQ9WTU3 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scn8aQ9WTU3 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn8aQ9WTU3 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn8aQ9WTU3 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Scn8aQ9WTU3 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn8aQ9WTU3 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn8aQ9WTU3 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn8aQ9WTU3 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Scn8aQ9WTU3 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn8aQ9WTU3 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn8aQ9WTU3 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn8aQ9WTU3 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Scn8aQ9WTU3 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms