Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.69□□□□□ -0.22
Cdh17Q9R100 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.69□□□□□ -0.22
Cdh17Q9R100 AW822252-206ENSMUST00000208904 237 ntBASIC13.69□□□□□ -0.22
Cdh17Q9R100 Gm45453-201ENSMUST00000211758 853 ntBASIC13.69□□□□□ -0.22
Cdh17Q9R100 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.69□□□□□ -0.22
Cdh17Q9R100 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Cdh17Q9R100 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh17Q9R100 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh17Q9R100 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Cdh17Q9R100 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh17Q9R100 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Cdh17Q9R100 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh17Q9R100 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh17Q9R100 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh17Q9R100 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh17Q9R100 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh17Q9R100 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh17Q9R100 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Cdh17Q9R100 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh17Q9R100 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh17Q9R100 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh17Q9R100 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh17Q9R100 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh17Q9R100 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh17Q9R100 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh17Q9R100 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh17Q9R100 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh17Q9R100 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh17Q9R100 Acot6-202ENSMUST00000222921 3622 ntBASIC13.68□□□□□ -0.22
Cdh17Q9R100 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Cdh17Q9R100 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Cdh17Q9R100 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh17Q9R100 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.68□□□□□ -0.22
Cdh17Q9R100 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.68□□□□□ -0.22
Cdh17Q9R100 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Cdh17Q9R100 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh17Q9R100 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh17Q9R100 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.68□□□□□ -0.22
Cdh17Q9R100 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.68□□□□□ -0.22
Cdh17Q9R100 Gm27525-201ENSMUST00000184465 107 ntBASIC13.68□□□□□ -0.22
Cdh17Q9R100 Gm5264-201ENSMUST00000190584 848 ntBASIC13.68□□□□□ -0.22
Cdh17Q9R100 Gm18049-201ENSMUST00000208909 581 ntBASIC13.68□□□□□ -0.22
Cdh17Q9R100 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.68□□□□□ -0.22
Cdh17Q9R100 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh17Q9R100 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.68□□□□□ -0.22
Cdh17Q9R100 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh17Q9R100 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh17Q9R100 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.68□□□□□ -0.22
Cdh17Q9R100 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh17Q9R100 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.68□□□□□ -0.22
Cdh17Q9R100 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh17Q9R100 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cdh17Q9R100 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh17Q9R100 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Cdh17Q9R100 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh17Q9R100 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh17Q9R100 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh17Q9R100 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh17Q9R100 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.68□□□□□ -0.22
Cdh17Q9R100 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh17Q9R100 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Cdh17Q9R100 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Cdh17Q9R100 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh17Q9R100 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cdh17Q9R100 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Cdh17Q9R100 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh17Q9R100 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.67□□□□□ -0.22
Cdh17Q9R100 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh17Q9R100 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh17Q9R100 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.67□□□□□ -0.22
Cdh17Q9R100 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC13.67□□□□□ -0.22
Cdh17Q9R100 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh17Q9R100 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh17Q9R100 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh17Q9R100 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Cdh17Q9R100 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Cdh17Q9R100 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh17Q9R100 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh17Q9R100 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh17Q9R100 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh17Q9R100 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh17Q9R100 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Cdh17Q9R100 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Cdh17Q9R100 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Cdh17Q9R100 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh17Q9R100 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.67□□□□□ -0.22
Cdh17Q9R100 Gm4995-201ENSMUST00000117247 432 ntBASIC13.67□□□□□ -0.22
Cdh17Q9R100 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.67□□□□□ -0.22
Cdh17Q9R100 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.67□□□□□ -0.22
Cdh17Q9R100 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh17Q9R100 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh17Q9R100 Gm27631-201ENSMUST00000184163 466 ntBASIC13.67□□□□□ -0.22
Cdh17Q9R100 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh17Q9R100 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Cdh17Q9R100 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh17Q9R100 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh17Q9R100 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh17Q9R100 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh17Q9R100 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh17Q9R100 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms