Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Scn11aQ9R053 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC16.38■□□□□ 0.21
Scn11aQ9R053 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC16.38■□□□□ 0.21
Scn11aQ9R053 Gm6013-201ENSMUST00000212264 699 ntBASIC16.38■□□□□ 0.21
Scn11aQ9R053 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn11aQ9R053 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn11aQ9R053 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn11aQ9R053 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Scn11aQ9R053 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Scn11aQ9R053 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC16.38■□□□□ 0.21
Scn11aQ9R053 Dctn4-202ENSMUST00000223590 1530 ntBASIC16.38■□□□□ 0.21
Scn11aQ9R053 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn11aQ9R053 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn11aQ9R053 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn11aQ9R053 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Scn11aQ9R053 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn11aQ9R053 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn11aQ9R053 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Scn11aQ9R053 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn11aQ9R053 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Scn11aQ9R053 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Scn11aQ9R053 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Scn11aQ9R053 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC16.38■□□□□ 0.21
Scn11aQ9R053 Gm38197-201ENSMUST00000192320 2122 ntBASIC16.38■□□□□ 0.21
Scn11aQ9R053 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC16.38■□□□□ 0.21
Scn11aQ9R053 Gm43758-201ENSMUST00000199500 367 ntBASIC16.38■□□□□ 0.21
Scn11aQ9R053 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn11aQ9R053 Gm3695-201ENSMUST00000087222 1009 ntBASIC16.38■□□□□ 0.21
Scn11aQ9R053 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn11aQ9R053 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn11aQ9R053 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn11aQ9R053 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn11aQ9R053 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn11aQ9R053 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Scn11aQ9R053 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Scn11aQ9R053 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn11aQ9R053 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC16.37■□□□□ 0.21
Scn11aQ9R053 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Scn11aQ9R053 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC16.37■□□□□ 0.21
Scn11aQ9R053 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn11aQ9R053 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn11aQ9R053 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn11aQ9R053 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn11aQ9R053 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn11aQ9R053 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn11aQ9R053 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn11aQ9R053 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn11aQ9R053 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn11aQ9R053 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Scn11aQ9R053 Gm7029-201ENSMUST00000173226 450 ntBASIC16.37■□□□□ 0.21
Scn11aQ9R053 Gm19184-201ENSMUST00000196798 928 ntBASIC16.37■□□□□ 0.21
Scn11aQ9R053 Gm9299-201ENSMUST00000206392 1140 ntBASIC16.37■□□□□ 0.21
Scn11aQ9R053 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Scn11aQ9R053 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC16.37■□□□□ 0.21
Scn11aQ9R053 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
Scn11aQ9R053 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC16.37■□□□□ 0.21
Scn11aQ9R053 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn11aQ9R053 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Scn11aQ9R053 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn11aQ9R053 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn11aQ9R053 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn11aQ9R053 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn11aQ9R053 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC16.37■□□□□ 0.21
Scn11aQ9R053 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn11aQ9R053 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Scn11aQ9R053 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn11aQ9R053 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn11aQ9R053 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn11aQ9R053 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn11aQ9R053 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn11aQ9R053 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Scn11aQ9R053 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC16.36■□□□□ 0.21
Scn11aQ9R053 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC16.36■□□□□ 0.21
Scn11aQ9R053 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Scn11aQ9R053 AC155237.1-201ENSMUST00000226196 1279 ntBASIC16.36■□□□□ 0.21
Scn11aQ9R053 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn11aQ9R053 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Scn11aQ9R053 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Scn11aQ9R053 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Scn11aQ9R053 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn11aQ9R053 Abhd6-203ENSMUST00000225234 1958 ntBASIC16.36■□□□□ 0.21
Scn11aQ9R053 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn11aQ9R053 Gm15544-201ENSMUST00000118776 1531 ntBASIC16.36■□□□□ 0.21
Scn11aQ9R053 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC16.36■□□□□ 0.21
Scn11aQ9R053 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn11aQ9R053 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC16.36■□□□□ 0.21
Scn11aQ9R053 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Scn11aQ9R053 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn11aQ9R053 Gm11618-201ENSMUST00000117946 267 ntBASIC16.36■□□□□ 0.21
Scn11aQ9R053 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC16.36■□□□□ 0.21
Scn11aQ9R053 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC16.36■□□□□ 0.21
Scn11aQ9R053 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
Scn11aQ9R053 Gm42550-201ENSMUST00000201553 960 ntBASIC16.36■□□□□ 0.21
Scn11aQ9R053 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC16.36■□□□□ 0.21
Scn11aQ9R053 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
Scn11aQ9R053 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn11aQ9R053 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn11aQ9R053 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn11aQ9R053 Rn7sk-201ENSMUST00000083103 331 ntBASIC16.36■□□□□ 0.21
Scn11aQ9R053 Gm26315-201ENSMUST00000083890 321 ntBASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms