Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Crlf1Q9JM58 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Crlf1Q9JM58 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Crlf1Q9JM58 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Crlf1Q9JM58 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Crlf1Q9JM58 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Crlf1Q9JM58 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.61
Crlf1Q9JM58 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Crlf1Q9JM58 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Crlf1Q9JM58 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Crlf1Q9JM58 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Crlf1Q9JM58 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Crlf1Q9JM58 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Crlf1Q9JM58 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Crlf1Q9JM58 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Crlf1Q9JM58 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC11.21□□□□□ -0.61
Crlf1Q9JM58 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Crlf1Q9JM58 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Crlf1Q9JM58 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Crlf1Q9JM58 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Crlf1Q9JM58 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Crlf1Q9JM58 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Crlf1Q9JM58 Gm11793-201ENSMUST00000120433 981 ntBASIC11.21□□□□□ -0.61
Crlf1Q9JM58 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Crlf1Q9JM58 Gm27682-201ENSMUST00000183930 110 ntBASIC11.21□□□□□ -0.61
Crlf1Q9JM58 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC11.21□□□□□ -0.61
Crlf1Q9JM58 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.21□□□□□ -0.61
Crlf1Q9JM58 Gm43133-201ENSMUST00000197472 463 ntBASIC11.21□□□□□ -0.61
Crlf1Q9JM58 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Crlf1Q9JM58 Gm45865-201ENSMUST00000211815 945 ntBASIC11.21□□□□□ -0.61
Crlf1Q9JM58 Gm5363-201ENSMUST00000211927 938 ntBASIC11.21□□□□□ -0.61
Crlf1Q9JM58 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Crlf1Q9JM58 Gm18027-201ENSMUST00000218947 619 ntBASIC11.21□□□□□ -0.61
Crlf1Q9JM58 Gm8598-201ENSMUST00000221184 836 ntBASIC11.21□□□□□ -0.61
Crlf1Q9JM58 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Crlf1Q9JM58 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Crlf1Q9JM58 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Crlf1Q9JM58 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Crlf1Q9JM58 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Crlf1Q9JM58 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Crlf1Q9JM58 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Crlf1Q9JM58 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Crlf1Q9JM58 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
Crlf1Q9JM58 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
Crlf1Q9JM58 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Crlf1Q9JM58 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.21□□□□□ -0.62
Crlf1Q9JM58 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Crlf1Q9JM58 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Crlf1Q9JM58 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Crlf1Q9JM58 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC11.21□□□□□ -0.62
Crlf1Q9JM58 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Crlf1Q9JM58 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Crlf1Q9JM58 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Crlf1Q9JM58 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Crlf1Q9JM58 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Crlf1Q9JM58 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Crlf1Q9JM58 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Crlf1Q9JM58 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.2□□□□□ -0.62
Crlf1Q9JM58 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Crlf1Q9JM58 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Crlf1Q9JM58 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.2□□□□□ -0.62
Crlf1Q9JM58 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Crlf1Q9JM58 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Crlf1Q9JM58 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Crlf1Q9JM58 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Crlf1Q9JM58 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Crlf1Q9JM58 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Crlf1Q9JM58 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Crlf1Q9JM58 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Crlf1Q9JM58 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Crlf1Q9JM58 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Crlf1Q9JM58 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.2□□□□□ -0.62
Crlf1Q9JM58 Gm12176-201ENSMUST00000121420 875 ntBASIC11.2□□□□□ -0.62
Crlf1Q9JM58 Gm10156-201ENSMUST00000122364 462 ntBASIC11.2□□□□□ -0.62
Crlf1Q9JM58 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.2□□□□□ -0.62
Crlf1Q9JM58 Gm6152-201ENSMUST00000151704 340 ntBASIC11.2□□□□□ -0.62
Crlf1Q9JM58 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Crlf1Q9JM58 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.2□□□□□ -0.62
Crlf1Q9JM58 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Crlf1Q9JM58 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC11.2□□□□□ -0.62
Crlf1Q9JM58 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Crlf1Q9JM58 Proscos-202ENSMUST00000178990 666 ntBASIC11.2□□□□□ -0.62
Crlf1Q9JM58 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.2□□□□□ -0.62
Crlf1Q9JM58 Gm37259-201ENSMUST00000193903 849 ntBASIC11.2□□□□□ -0.62
Crlf1Q9JM58 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.2□□□□□ -0.62
Crlf1Q9JM58 Olfr284-202ENSMUST00000206647 966 ntBASIC11.2□□□□□ -0.62
Crlf1Q9JM58 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.2□□□□□ -0.62
Crlf1Q9JM58 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.2□□□□□ -0.62
Crlf1Q9JM58 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Crlf1Q9JM58 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Crlf1Q9JM58 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Crlf1Q9JM58 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Crlf1Q9JM58 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Crlf1Q9JM58 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Crlf1Q9JM58 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Crlf1Q9JM58 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Crlf1Q9JM58 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Crlf1Q9JM58 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Crlf1Q9JM58 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Crlf1Q9JM58 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms