Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Upk3aQ9JKX8 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Upk3aQ9JKX8 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Upk3aQ9JKX8 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
Upk3aQ9JKX8 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.5□□□□□ -0.25
Upk3aQ9JKX8 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.5□□□□□ -0.25
Upk3aQ9JKX8 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.5□□□□□ -0.25
Upk3aQ9JKX8 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Upk3aQ9JKX8 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.5□□□□□ -0.25
Upk3aQ9JKX8 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.5□□□□□ -0.25
Upk3aQ9JKX8 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.5□□□□□ -0.25
Upk3aQ9JKX8 Gm8927-201ENSMUST00000181978 981 ntBASIC13.5□□□□□ -0.25
Upk3aQ9JKX8 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Upk3aQ9JKX8 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Upk3aQ9JKX8 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.5□□□□□ -0.25
Upk3aQ9JKX8 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.5□□□□□ -0.25
Upk3aQ9JKX8 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Upk3aQ9JKX8 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Upk3aQ9JKX8 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Upk3aQ9JKX8 Gm3222-201ENSMUST00000071282 990 ntBASIC13.5□□□□□ -0.25
Upk3aQ9JKX8 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Upk3aQ9JKX8 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Upk3aQ9JKX8 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Upk3aQ9JKX8 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Upk3aQ9JKX8 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Upk3aQ9JKX8 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Upk3aQ9JKX8 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Upk3aQ9JKX8 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Upk3aQ9JKX8 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Upk3aQ9JKX8 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Upk3aQ9JKX8 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Upk3aQ9JKX8 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Upk3aQ9JKX8 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.5□□□□□ -0.25
Upk3aQ9JKX8 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Upk3aQ9JKX8 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Upk3aQ9JKX8 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk3aQ9JKX8 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.49□□□□□ -0.25
Upk3aQ9JKX8 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk3aQ9JKX8 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.49□□□□□ -0.25
Upk3aQ9JKX8 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk3aQ9JKX8 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk3aQ9JKX8 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.49□□□□□ -0.25
Upk3aQ9JKX8 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.49□□□□□ -0.25
Upk3aQ9JKX8 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk3aQ9JKX8 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Upk3aQ9JKX8 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Upk3aQ9JKX8 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk3aQ9JKX8 Mir698-201ENSMUST00000102164 109 ntBASIC13.49□□□□□ -0.25
Upk3aQ9JKX8 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk3aQ9JKX8 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.49□□□□□ -0.25
Upk3aQ9JKX8 Gm6912-201ENSMUST00000117218 544 ntBASIC13.49□□□□□ -0.25
Upk3aQ9JKX8 Gm13385-201ENSMUST00000121089 220 ntBASIC13.49□□□□□ -0.25
Upk3aQ9JKX8 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Upk3aQ9JKX8 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.49□□□□□ -0.25
Upk3aQ9JKX8 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.49□□□□□ -0.25
Upk3aQ9JKX8 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Upk3aQ9JKX8 Gm9522-201ENSMUST00000182394 926 ntBASIC13.49□□□□□ -0.25
Upk3aQ9JKX8 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.49□□□□□ -0.25
Upk3aQ9JKX8 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.49□□□□□ -0.25
Upk3aQ9JKX8 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.49□□□□□ -0.25
Upk3aQ9JKX8 Gm5425-201ENSMUST00000214125 459 ntBASIC13.49□□□□□ -0.25
Upk3aQ9JKX8 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.49□□□□□ -0.25
Upk3aQ9JKX8 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.49□□□□□ -0.25
Upk3aQ9JKX8 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.49□□□□□ -0.25
Upk3aQ9JKX8 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk3aQ9JKX8 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk3aQ9JKX8 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk3aQ9JKX8 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk3aQ9JKX8 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Upk3aQ9JKX8 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Upk3aQ9JKX8 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk3aQ9JKX8 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Upk3aQ9JKX8 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk3aQ9JKX8 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk3aQ9JKX8 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Upk3aQ9JKX8 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Upk3aQ9JKX8 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk3aQ9JKX8 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Upk3aQ9JKX8 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk3aQ9JKX8 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Upk3aQ9JKX8 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk3aQ9JKX8 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Upk3aQ9JKX8 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk3aQ9JKX8 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk3aQ9JKX8 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk3aQ9JKX8 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk3aQ9JKX8 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Upk3aQ9JKX8 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Upk3aQ9JKX8 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk3aQ9JKX8 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk3aQ9JKX8 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk3aQ9JKX8 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk3aQ9JKX8 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk3aQ9JKX8 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Upk3aQ9JKX8 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Upk3aQ9JKX8 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Upk3aQ9JKX8 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Upk3aQ9JKX8 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.48□□□□□ -0.25
Upk3aQ9JKX8 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.48□□□□□ -0.25
Upk3aQ9JKX8 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms