Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgn3Q9DCB1 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.19□□□□□ -0.3
Hmgn3Q9DCB1 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgn3Q9DCB1 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Hmgn3Q9DCB1 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgn3Q9DCB1 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Hmgn3Q9DCB1 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgn3Q9DCB1 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC13.19□□□□□ -0.3
Hmgn3Q9DCB1 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgn3Q9DCB1 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC13.19□□□□□ -0.3
Hmgn3Q9DCB1 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgn3Q9DCB1 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.19□□□□□ -0.3
Hmgn3Q9DCB1 Ank2-226ENSMUST00000189368 339 ntBASIC13.19□□□□□ -0.3
Hmgn3Q9DCB1 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.19□□□□□ -0.3
Hmgn3Q9DCB1 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC13.19□□□□□ -0.3
Hmgn3Q9DCB1 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.19□□□□□ -0.3
Hmgn3Q9DCB1 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.19□□□□□ -0.3
Hmgn3Q9DCB1 AC160338.1-201ENSMUST00000214232 705 ntBASIC13.19□□□□□ -0.3
Hmgn3Q9DCB1 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC13.19□□□□□ -0.3
Hmgn3Q9DCB1 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.19□□□□□ -0.3
Hmgn3Q9DCB1 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgn3Q9DCB1 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Hmgn3Q9DCB1 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.19□□□□□ -0.3
Hmgn3Q9DCB1 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgn3Q9DCB1 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Hmgn3Q9DCB1 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgn3Q9DCB1 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.19□□□□□ -0.3
Hmgn3Q9DCB1 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgn3Q9DCB1 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgn3Q9DCB1 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgn3Q9DCB1 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgn3Q9DCB1 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgn3Q9DCB1 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.19□□□□□ -0.3
Hmgn3Q9DCB1 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgn3Q9DCB1 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgn3Q9DCB1 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.19□□□□□ -0.3
Hmgn3Q9DCB1 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Hmgn3Q9DCB1 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.19□□□□□ -0.3
Hmgn3Q9DCB1 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC13.19□□□□□ -0.3
Hmgn3Q9DCB1 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.19□□□□□ -0.3
Hmgn3Q9DCB1 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.19□□□□□ -0.3
Hmgn3Q9DCB1 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Hmgn3Q9DCB1 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgn3Q9DCB1 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgn3Q9DCB1 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.18□□□□□ -0.3
Hmgn3Q9DCB1 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgn3Q9DCB1 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgn3Q9DCB1 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Hmgn3Q9DCB1 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgn3Q9DCB1 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.18□□□□□ -0.3
Hmgn3Q9DCB1 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgn3Q9DCB1 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgn3Q9DCB1 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgn3Q9DCB1 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgn3Q9DCB1 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgn3Q9DCB1 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgn3Q9DCB1 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Hmgn3Q9DCB1 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgn3Q9DCB1 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Hmgn3Q9DCB1 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.18□□□□□ -0.3
Hmgn3Q9DCB1 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC13.18□□□□□ -0.3
Hmgn3Q9DCB1 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.18□□□□□ -0.3
Hmgn3Q9DCB1 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgn3Q9DCB1 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.18□□□□□ -0.3
Hmgn3Q9DCB1 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgn3Q9DCB1 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgn3Q9DCB1 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgn3Q9DCB1 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgn3Q9DCB1 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgn3Q9DCB1 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.18□□□□□ -0.3
Hmgn3Q9DCB1 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgn3Q9DCB1 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgn3Q9DCB1 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgn3Q9DCB1 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgn3Q9DCB1 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgn3Q9DCB1 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgn3Q9DCB1 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgn3Q9DCB1 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.18□□□□□ -0.3
Hmgn3Q9DCB1 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgn3Q9DCB1 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgn3Q9DCB1 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgn3Q9DCB1 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgn3Q9DCB1 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.18□□□□□ -0.3
Hmgn3Q9DCB1 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn3Q9DCB1 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn3Q9DCB1 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Hmgn3Q9DCB1 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn3Q9DCB1 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn3Q9DCB1 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn3Q9DCB1 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn3Q9DCB1 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Hmgn3Q9DCB1 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Hmgn3Q9DCB1 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn3Q9DCB1 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.17□□□□□ -0.3
Hmgn3Q9DCB1 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Hmgn3Q9DCB1 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC13.17□□□□□ -0.3
Hmgn3Q9DCB1 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn3Q9DCB1 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn3Q9DCB1 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Hmgn3Q9DCB1 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms