Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmg20aQ9DC33 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmg20aQ9DC33 Gm8344-201ENSMUST00000119813 856 ntBASIC12.83□□□□□ -0.36
Hmg20aQ9DC33 Gm12497-201ENSMUST00000138778 237 ntBASIC12.83□□□□□ -0.36
Hmg20aQ9DC33 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12.83□□□□□ -0.36
Hmg20aQ9DC33 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC12.83□□□□□ -0.36
Hmg20aQ9DC33 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmg20aQ9DC33 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmg20aQ9DC33 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmg20aQ9DC33 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmg20aQ9DC33 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.83□□□□□ -0.36
Hmg20aQ9DC33 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmg20aQ9DC33 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hmg20aQ9DC33 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmg20aQ9DC33 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmg20aQ9DC33 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hmg20aQ9DC33 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hmg20aQ9DC33 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Hmg20aQ9DC33 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hmg20aQ9DC33 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Hmg20aQ9DC33 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hmg20aQ9DC33 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmg20aQ9DC33 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmg20aQ9DC33 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmg20aQ9DC33 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmg20aQ9DC33 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmg20aQ9DC33 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.82□□□□□ -0.36
Hmg20aQ9DC33 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmg20aQ9DC33 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Hmg20aQ9DC33 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmg20aQ9DC33 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Hmg20aQ9DC33 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hmg20aQ9DC33 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.82□□□□□ -0.36
Hmg20aQ9DC33 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.82□□□□□ -0.36
Hmg20aQ9DC33 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmg20aQ9DC33 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmg20aQ9DC33 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmg20aQ9DC33 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmg20aQ9DC33 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.82□□□□□ -0.36
Hmg20aQ9DC33 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hmg20aQ9DC33 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmg20aQ9DC33 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmg20aQ9DC33 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.82□□□□□ -0.36
Hmg20aQ9DC33 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmg20aQ9DC33 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hmg20aQ9DC33 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Hmg20aQ9DC33 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmg20aQ9DC33 AC124569.2-201ENSMUST00000225998 818 ntBASIC12.82□□□□□ -0.36
Hmg20aQ9DC33 Cmtm5-203ENSMUST00000227441 610 ntBASIC12.82□□□□□ -0.36
Hmg20aQ9DC33 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmg20aQ9DC33 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC12.82□□□□□ -0.36
Hmg20aQ9DC33 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.82□□□□□ -0.36
Hmg20aQ9DC33 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmg20aQ9DC33 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmg20aQ9DC33 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Hmg20aQ9DC33 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmg20aQ9DC33 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hmg20aQ9DC33 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Hmg20aQ9DC33 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Hmg20aQ9DC33 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.81□□□□□ -0.36
Hmg20aQ9DC33 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.81□□□□□ -0.36
Hmg20aQ9DC33 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hmg20aQ9DC33 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmg20aQ9DC33 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmg20aQ9DC33 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmg20aQ9DC33 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmg20aQ9DC33 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Hmg20aQ9DC33 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.81□□□□□ -0.36
Hmg20aQ9DC33 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hmg20aQ9DC33 Gm14042-201ENSMUST00000120139 833 ntBASIC12.81□□□□□ -0.36
Hmg20aQ9DC33 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Hmg20aQ9DC33 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Hmg20aQ9DC33 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hmg20aQ9DC33 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hmg20aQ9DC33 AC108846.1-201ENSMUST00000214531 513 ntBASIC12.81□□□□□ -0.36
Hmg20aQ9DC33 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Hmg20aQ9DC33 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmg20aQ9DC33 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmg20aQ9DC33 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmg20aQ9DC33 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Hmg20aQ9DC33 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hmg20aQ9DC33 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmg20aQ9DC33 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmg20aQ9DC33 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmg20aQ9DC33 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmg20aQ9DC33 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Hmg20aQ9DC33 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmg20aQ9DC33 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmg20aQ9DC33 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmg20aQ9DC33 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmg20aQ9DC33 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmg20aQ9DC33 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmg20aQ9DC33 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Hmg20aQ9DC33 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Hmg20aQ9DC33 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmg20aQ9DC33 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Hmg20aQ9DC33 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmg20aQ9DC33 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmg20aQ9DC33 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.8□□□□□ -0.36
Hmg20aQ9DC33 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms