Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
U2af1Q9D883 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
U2af1Q9D883 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
U2af1Q9D883 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
U2af1Q9D883 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
U2af1Q9D883 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
U2af1Q9D883 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
U2af1Q9D883 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC18.45■□□□□ 0.54
U2af1Q9D883 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
U2af1Q9D883 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
U2af1Q9D883 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
U2af1Q9D883 Gm42690-201ENSMUST00000197921 1836 ntBASIC18.45■□□□□ 0.54
U2af1Q9D883 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC18.45■□□□□ 0.54
U2af1Q9D883 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
U2af1Q9D883 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC18.45■□□□□ 0.54
U2af1Q9D883 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC18.45■□□□□ 0.54
U2af1Q9D883 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
U2af1Q9D883 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
U2af1Q9D883 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
U2af1Q9D883 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
U2af1Q9D883 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
U2af1Q9D883 AC159196.2-201ENSMUST00000224082 1622 ntBASIC18.45■□□□□ 0.54
U2af1Q9D883 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
U2af1Q9D883 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
U2af1Q9D883 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
U2af1Q9D883 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
U2af1Q9D883 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
U2af1Q9D883 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
U2af1Q9D883 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
U2af1Q9D883 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
U2af1Q9D883 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC18.44■□□□□ 0.54
U2af1Q9D883 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
U2af1Q9D883 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
U2af1Q9D883 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
U2af1Q9D883 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
U2af1Q9D883 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC18.44■□□□□ 0.54
U2af1Q9D883 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
U2af1Q9D883 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
U2af1Q9D883 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
U2af1Q9D883 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
U2af1Q9D883 AL593843.1-201ENSMUST00000195891 145 ntBASIC18.44■□□□□ 0.54
U2af1Q9D883 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
U2af1Q9D883 AC131690.1-201ENSMUST00000218406 374 ntBASIC18.44■□□□□ 0.54
U2af1Q9D883 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC18.44■□□□□ 0.54
U2af1Q9D883 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
U2af1Q9D883 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
U2af1Q9D883 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
U2af1Q9D883 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
U2af1Q9D883 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
U2af1Q9D883 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
U2af1Q9D883 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
U2af1Q9D883 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
U2af1Q9D883 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
U2af1Q9D883 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
U2af1Q9D883 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC18.44■□□□□ 0.54
U2af1Q9D883 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
U2af1Q9D883 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
U2af1Q9D883 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
U2af1Q9D883 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
U2af1Q9D883 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
U2af1Q9D883 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC18.43■□□□□ 0.54
U2af1Q9D883 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
U2af1Q9D883 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
U2af1Q9D883 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
U2af1Q9D883 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
U2af1Q9D883 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
U2af1Q9D883 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC18.43■□□□□ 0.54
U2af1Q9D883 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
U2af1Q9D883 AC139580.1-202ENSMUST00000223574 928 ntBASIC18.43■□□□□ 0.54
U2af1Q9D883 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
U2af1Q9D883 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
U2af1Q9D883 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
U2af1Q9D883 Mir497b-201ENSMUST00000093601 125 ntBASIC18.43■□□□□ 0.54
U2af1Q9D883 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
U2af1Q9D883 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC18.43■□□□□ 0.54
U2af1Q9D883 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
U2af1Q9D883 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
U2af1Q9D883 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC18.42■□□□□ 0.54
U2af1Q9D883 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC18.42■□□□□ 0.54
U2af1Q9D883 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
U2af1Q9D883 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
U2af1Q9D883 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
U2af1Q9D883 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
U2af1Q9D883 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
U2af1Q9D883 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
U2af1Q9D883 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
U2af1Q9D883 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
U2af1Q9D883 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
U2af1Q9D883 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
U2af1Q9D883 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
U2af1Q9D883 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
U2af1Q9D883 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
U2af1Q9D883 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
U2af1Q9D883 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC18.42■□□□□ 0.54
U2af1Q9D883 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC18.42■□□□□ 0.54
U2af1Q9D883 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC18.42■□□□□ 0.54
U2af1Q9D883 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC18.42■□□□□ 0.54
U2af1Q9D883 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
U2af1Q9D883 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
U2af1Q9D883 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms