Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Mrpl55Q9CZ83 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC9.34□□□□□ -0.91
Mrpl55Q9CZ83 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Mrpl55Q9CZ83 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Mrpl55Q9CZ83 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Mrpl55Q9CZ83 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Mrpl55Q9CZ83 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Mrpl55Q9CZ83 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Mrpl55Q9CZ83 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC9.34□□□□□ -0.91
Mrpl55Q9CZ83 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC9.34□□□□□ -0.91
Mrpl55Q9CZ83 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Mrpl55Q9CZ83 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Mrpl55Q9CZ83 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC9.34□□□□□ -0.91
Mrpl55Q9CZ83 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC9.34□□□□□ -0.91
Mrpl55Q9CZ83 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC9.34□□□□□ -0.91
Mrpl55Q9CZ83 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC9.34□□□□□ -0.91
Mrpl55Q9CZ83 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Mrpl55Q9CZ83 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC9.34□□□□□ -0.91
Mrpl55Q9CZ83 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Mrpl55Q9CZ83 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Mrpl55Q9CZ83 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC9.34□□□□□ -0.91
Mrpl55Q9CZ83 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Mrpl55Q9CZ83 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Mrpl55Q9CZ83 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Mrpl55Q9CZ83 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Mrpl55Q9CZ83 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Mrpl55Q9CZ83 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Mrpl55Q9CZ83 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Mrpl55Q9CZ83 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC9.34□□□□□ -0.91
Mrpl55Q9CZ83 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Mrpl55Q9CZ83 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Mrpl55Q9CZ83 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC9.34□□□□□ -0.91
Mrpl55Q9CZ83 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Mrpl55Q9CZ83 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Mrpl55Q9CZ83 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Mrpl55Q9CZ83 Best4-ps-201ENSMUST00000129783 1380 ntBASIC9.34□□□□□ -0.91
Mrpl55Q9CZ83 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Mrpl55Q9CZ83 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC9.34□□□□□ -0.91
Mrpl55Q9CZ83 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Mrpl55Q9CZ83 Grk6-207ENSMUST00000225925 2769 ntBASIC9.34□□□□□ -0.91
Mrpl55Q9CZ83 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Mrpl55Q9CZ83 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Mrpl55Q9CZ83 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Mrpl55Q9CZ83 Gm38094-201ENSMUST00000195864 2978 ntBASIC9.33□□□□□ -0.92
Mrpl55Q9CZ83 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Mrpl55Q9CZ83 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Mrpl55Q9CZ83 Gm42928-201ENSMUST00000197338 3339 ntBASIC9.33□□□□□ -0.92
Mrpl55Q9CZ83 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Mrpl55Q9CZ83 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Mrpl55Q9CZ83 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Mrpl55Q9CZ83 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Mrpl55Q9CZ83 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Mrpl55Q9CZ83 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC9.33□□□□□ -0.92
Mrpl55Q9CZ83 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Mrpl55Q9CZ83 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC9.33□□□□□ -0.92
Mrpl55Q9CZ83 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Mrpl55Q9CZ83 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Mrpl55Q9CZ83 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC9.33□□□□□ -0.92
Mrpl55Q9CZ83 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
Mrpl55Q9CZ83 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC9.33□□□□□ -0.92
Mrpl55Q9CZ83 Gm27300-201ENSMUST00000184085 97 ntBASIC9.33□□□□□ -0.92
Mrpl55Q9CZ83 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC9.33□□□□□ -0.92
Mrpl55Q9CZ83 Gm27335-201ENSMUST00000184758 97 ntBASIC9.33□□□□□ -0.92
Mrpl55Q9CZ83 Gm43575-201ENSMUST00000196420 516 ntBASIC9.33□□□□□ -0.92
Mrpl55Q9CZ83 Gm7229-201ENSMUST00000214719 1007 ntBASIC9.33□□□□□ -0.92
Mrpl55Q9CZ83 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Mrpl55Q9CZ83 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Mrpl55Q9CZ83 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Mrpl55Q9CZ83 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Mrpl55Q9CZ83 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Mrpl55Q9CZ83 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Mrpl55Q9CZ83 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Mrpl55Q9CZ83 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Mrpl55Q9CZ83 AC164702.1-201ENSMUST00000220135 2212 ntBASIC9.33□□□□□ -0.92
Mrpl55Q9CZ83 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Mrpl55Q9CZ83 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Mrpl55Q9CZ83 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Mrpl55Q9CZ83 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Mrpl55Q9CZ83 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Mrpl55Q9CZ83 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Mrpl55Q9CZ83 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Mrpl55Q9CZ83 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Mrpl55Q9CZ83 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Mrpl55Q9CZ83 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Mrpl55Q9CZ83 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Mrpl55Q9CZ83 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC9.33□□□□□ -0.92
Mrpl55Q9CZ83 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Mrpl55Q9CZ83 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Mrpl55Q9CZ83 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Mrpl55Q9CZ83 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Mrpl55Q9CZ83 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Mrpl55Q9CZ83 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Mrpl55Q9CZ83 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Mrpl55Q9CZ83 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Mrpl55Q9CZ83 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Mrpl55Q9CZ83 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Mrpl55Q9CZ83 Gm5366-201ENSMUST00000215494 1338 ntBASIC9.32□□□□□ -0.92
Mrpl55Q9CZ83 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Mrpl55Q9CZ83 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC9.32□□□□□ -0.92
Mrpl55Q9CZ83 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms