Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim13Q9CYB0 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim13Q9CYB0 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim13Q9CYB0 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.98□□□□□ -0.33
Trim13Q9CYB0 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim13Q9CYB0 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim13Q9CYB0 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim13Q9CYB0 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.98□□□□□ -0.33
Trim13Q9CYB0 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trim13Q9CYB0 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim13Q9CYB0 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim13Q9CYB0 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim13Q9CYB0 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim13Q9CYB0 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim13Q9CYB0 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim13Q9CYB0 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC12.98□□□□□ -0.33
Trim13Q9CYB0 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC12.98□□□□□ -0.33
Trim13Q9CYB0 Gm8584-201ENSMUST00000171982 758 ntBASIC12.98□□□□□ -0.33
Trim13Q9CYB0 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim13Q9CYB0 AC161829.1-201ENSMUST00000220298 281 ntBASIC12.98□□□□□ -0.33
Trim13Q9CYB0 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC12.98□□□□□ -0.33
Trim13Q9CYB0 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trim13Q9CYB0 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim13Q9CYB0 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim13Q9CYB0 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim13Q9CYB0 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.98□□□□□ -0.33
Trim13Q9CYB0 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Trim13Q9CYB0 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim13Q9CYB0 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim13Q9CYB0 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim13Q9CYB0 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC12.98□□□□□ -0.33
Trim13Q9CYB0 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim13Q9CYB0 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim13Q9CYB0 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim13Q9CYB0 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim13Q9CYB0 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim13Q9CYB0 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim13Q9CYB0 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim13Q9CYB0 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim13Q9CYB0 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim13Q9CYB0 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim13Q9CYB0 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim13Q9CYB0 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim13Q9CYB0 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim13Q9CYB0 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim13Q9CYB0 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim13Q9CYB0 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim13Q9CYB0 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim13Q9CYB0 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim13Q9CYB0 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim13Q9CYB0 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim13Q9CYB0 Gm16026-204ENSMUST00000162652 683 ntBASIC12.97□□□□□ -0.33
Trim13Q9CYB0 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trim13Q9CYB0 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC12.97□□□□□ -0.33
Trim13Q9CYB0 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim13Q9CYB0 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC12.97□□□□□ -0.33
Trim13Q9CYB0 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.97□□□□□ -0.33
Trim13Q9CYB0 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC12.97□□□□□ -0.33
Trim13Q9CYB0 Gm18195-201ENSMUST00000207604 706 ntBASIC12.97□□□□□ -0.33
Trim13Q9CYB0 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
Trim13Q9CYB0 AV026068-213ENSMUST00000223675 1171 ntBASIC12.97□□□□□ -0.33
Trim13Q9CYB0 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.97□□□□□ -0.33
Trim13Q9CYB0 Mzt1-203ENSMUST00000227948 952 ntBASIC12.97□□□□□ -0.33
Trim13Q9CYB0 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim13Q9CYB0 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim13Q9CYB0 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trim13Q9CYB0 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim13Q9CYB0 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim13Q9CYB0 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim13Q9CYB0 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim13Q9CYB0 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim13Q9CYB0 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trim13Q9CYB0 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim13Q9CYB0 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim13Q9CYB0 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim13Q9CYB0 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim13Q9CYB0 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trim13Q9CYB0 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trim13Q9CYB0 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim13Q9CYB0 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim13Q9CYB0 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim13Q9CYB0 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim13Q9CYB0 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim13Q9CYB0 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim13Q9CYB0 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim13Q9CYB0 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.96□□□□□ -0.33
Trim13Q9CYB0 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.96□□□□□ -0.33
Trim13Q9CYB0 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim13Q9CYB0 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim13Q9CYB0 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim13Q9CYB0 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim13Q9CYB0 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Trim13Q9CYB0 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim13Q9CYB0 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim13Q9CYB0 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim13Q9CYB0 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim13Q9CYB0 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim13Q9CYB0 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trim13Q9CYB0 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim13Q9CYB0 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms