Protein–RNA interactions for Protein: Q9CVD2

Atxn3, Ataxin-3, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn3Q9CVD2 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Atxn3Q9CVD2 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Atxn3Q9CVD2 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC18.05■□□□□ 0.48
Atxn3Q9CVD2 Gm22189-201ENSMUST00000103822 86 ntBASIC18.05■□□□□ 0.48
Atxn3Q9CVD2 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Atxn3Q9CVD2 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Atxn3Q9CVD2 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Atxn3Q9CVD2 Gm6283-201ENSMUST00000182369 1000 ntBASIC18.05■□□□□ 0.48
Atxn3Q9CVD2 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC18.05■□□□□ 0.48
Atxn3Q9CVD2 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC18.05■□□□□ 0.48
Atxn3Q9CVD2 AC124732.1-201ENSMUST00000221551 910 ntBASIC18.05■□□□□ 0.48
Atxn3Q9CVD2 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Atxn3Q9CVD2 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Atxn3Q9CVD2 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Atxn3Q9CVD2 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Atxn3Q9CVD2 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Atxn3Q9CVD2 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Atxn3Q9CVD2 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Atxn3Q9CVD2 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Atxn3Q9CVD2 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Atxn3Q9CVD2 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Atxn3Q9CVD2 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Atxn3Q9CVD2 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Atxn3Q9CVD2 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Atxn3Q9CVD2 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Atxn3Q9CVD2 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Atxn3Q9CVD2 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Atxn3Q9CVD2 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atxn3Q9CVD2 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atxn3Q9CVD2 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atxn3Q9CVD2 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atxn3Q9CVD2 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atxn3Q9CVD2 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atxn3Q9CVD2 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atxn3Q9CVD2 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atxn3Q9CVD2 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Atxn3Q9CVD2 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Atxn3Q9CVD2 AC148324.1-201ENSMUST00000219034 4240 ntBASIC18.04■□□□□ 0.48
Atxn3Q9CVD2 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atxn3Q9CVD2 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Atxn3Q9CVD2 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC18.04■□□□□ 0.48
Atxn3Q9CVD2 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Atxn3Q9CVD2 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Atxn3Q9CVD2 Gm44855-201ENSMUST00000205725 362 ntBASIC18.04■□□□□ 0.48
Atxn3Q9CVD2 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC18.04■□□□□ 0.48
Atxn3Q9CVD2 Gm6218-201ENSMUST00000219812 628 ntBASIC18.04■□□□□ 0.48
Atxn3Q9CVD2 Gm20445-201ENSMUST00000061905 565 ntBASIC18.04■□□□□ 0.48
Atxn3Q9CVD2 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atxn3Q9CVD2 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atxn3Q9CVD2 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atxn3Q9CVD2 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Atxn3Q9CVD2 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
Atxn3Q9CVD2 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atxn3Q9CVD2 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atxn3Q9CVD2 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atxn3Q9CVD2 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atxn3Q9CVD2 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atxn3Q9CVD2 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
Atxn3Q9CVD2 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atxn3Q9CVD2 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC18.03■□□□□ 0.48
Atxn3Q9CVD2 Gm42690-201ENSMUST00000197921 1836 ntBASIC18.03■□□□□ 0.48
Atxn3Q9CVD2 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atxn3Q9CVD2 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atxn3Q9CVD2 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Atxn3Q9CVD2 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atxn3Q9CVD2 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atxn3Q9CVD2 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atxn3Q9CVD2 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atxn3Q9CVD2 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atxn3Q9CVD2 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Atxn3Q9CVD2 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Atxn3Q9CVD2 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Atxn3Q9CVD2 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atxn3Q9CVD2 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atxn3Q9CVD2 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atxn3Q9CVD2 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
Atxn3Q9CVD2 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Atxn3Q9CVD2 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atxn3Q9CVD2 Gm14452-201ENSMUST00000118680 1632 ntBASIC18.02■□□□□ 0.48
Atxn3Q9CVD2 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atxn3Q9CVD2 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Atxn3Q9CVD2 Zkscan14-203ENSMUST00000198959 2243 ntBASIC18.02■□□□□ 0.48
Atxn3Q9CVD2 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Atxn3Q9CVD2 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atxn3Q9CVD2 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atxn3Q9CVD2 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Atxn3Q9CVD2 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Atxn3Q9CVD2 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Atxn3Q9CVD2 AC131690.1-201ENSMUST00000218406 374 ntBASIC18.02■□□□□ 0.48
Atxn3Q9CVD2 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atxn3Q9CVD2 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atxn3Q9CVD2 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atxn3Q9CVD2 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Atxn3Q9CVD2 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Atxn3Q9CVD2 Gm15889-202ENSMUST00000212669 2443 ntBASIC18.02■□□□□ 0.47
Atxn3Q9CVD2 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Atxn3Q9CVD2 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Atxn3Q9CVD2 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Atxn3Q9CVD2 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Atxn3Q9CVD2 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms