Protein–RNA interactions for Protein: Q9CQE1

Nipsnap3b, Protein NipSnap homolog 3B, mousemouse

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nipsnap3bQ9CQE1 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nipsnap3bQ9CQE1 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Nipsnap3bQ9CQE1 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nipsnap3bQ9CQE1 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nipsnap3bQ9CQE1 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nipsnap3bQ9CQE1 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nipsnap3bQ9CQE1 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nipsnap3bQ9CQE1 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nipsnap3bQ9CQE1 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Nipsnap3bQ9CQE1 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.85□□□□□ -0.19
Nipsnap3bQ9CQE1 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nipsnap3bQ9CQE1 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.85□□□□□ -0.19
Nipsnap3bQ9CQE1 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nipsnap3bQ9CQE1 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nipsnap3bQ9CQE1 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nipsnap3bQ9CQE1 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nipsnap3bQ9CQE1 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.85□□□□□ -0.19
Nipsnap3bQ9CQE1 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.85□□□□□ -0.19
Nipsnap3bQ9CQE1 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nipsnap3bQ9CQE1 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nipsnap3bQ9CQE1 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.85□□□□□ -0.19
Nipsnap3bQ9CQE1 Gm11025-201ENSMUST00000140773 466 ntBASIC13.85□□□□□ -0.19
Nipsnap3bQ9CQE1 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.85□□□□□ -0.19
Nipsnap3bQ9CQE1 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nipsnap3bQ9CQE1 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
Nipsnap3bQ9CQE1 Mir8117-201ENSMUST00000184773 107 ntBASIC13.85□□□□□ -0.19
Nipsnap3bQ9CQE1 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.85□□□□□ -0.19
Nipsnap3bQ9CQE1 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nipsnap3bQ9CQE1 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nipsnap3bQ9CQE1 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Nipsnap3bQ9CQE1 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.85□□□□□ -0.19
Nipsnap3bQ9CQE1 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nipsnap3bQ9CQE1 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.85□□□□□ -0.19
Nipsnap3bQ9CQE1 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nipsnap3bQ9CQE1 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Nipsnap3bQ9CQE1 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Nipsnap3bQ9CQE1 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nipsnap3bQ9CQE1 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nipsnap3bQ9CQE1 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nipsnap3bQ9CQE1 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nipsnap3bQ9CQE1 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nipsnap3bQ9CQE1 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nipsnap3bQ9CQE1 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nipsnap3bQ9CQE1 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Nipsnap3bQ9CQE1 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nipsnap3bQ9CQE1 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nipsnap3bQ9CQE1 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nipsnap3bQ9CQE1 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nipsnap3bQ9CQE1 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nipsnap3bQ9CQE1 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.85□□□□□ -0.19
Nipsnap3bQ9CQE1 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nipsnap3bQ9CQE1 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nipsnap3bQ9CQE1 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nipsnap3bQ9CQE1 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.85□□□□□ -0.19
Nipsnap3bQ9CQE1 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Nipsnap3bQ9CQE1 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.84□□□□□ -0.19
Nipsnap3bQ9CQE1 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.84□□□□□ -0.19
Nipsnap3bQ9CQE1 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nipsnap3bQ9CQE1 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.84□□□□□ -0.19
Nipsnap3bQ9CQE1 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nipsnap3bQ9CQE1 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.84□□□□□ -0.19
Nipsnap3bQ9CQE1 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nipsnap3bQ9CQE1 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nipsnap3bQ9CQE1 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Nipsnap3bQ9CQE1 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Nipsnap3bQ9CQE1 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nipsnap3bQ9CQE1 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nipsnap3bQ9CQE1 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.84□□□□□ -0.19
Nipsnap3bQ9CQE1 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nipsnap3bQ9CQE1 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.84□□□□□ -0.19
Nipsnap3bQ9CQE1 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.84□□□□□ -0.19
Nipsnap3bQ9CQE1 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.84□□□□□ -0.19
Nipsnap3bQ9CQE1 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
Nipsnap3bQ9CQE1 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Nipsnap3bQ9CQE1 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.84□□□□□ -0.19
Nipsnap3bQ9CQE1 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nipsnap3bQ9CQE1 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nipsnap3bQ9CQE1 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nipsnap3bQ9CQE1 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nipsnap3bQ9CQE1 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nipsnap3bQ9CQE1 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nipsnap3bQ9CQE1 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.83□□□□□ -0.19
Nipsnap3bQ9CQE1 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.83□□□□□ -0.19
Nipsnap3bQ9CQE1 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Nipsnap3bQ9CQE1 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.83□□□□□ -0.19
Nipsnap3bQ9CQE1 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nipsnap3bQ9CQE1 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nipsnap3bQ9CQE1 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nipsnap3bQ9CQE1 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nipsnap3bQ9CQE1 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nipsnap3bQ9CQE1 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nipsnap3bQ9CQE1 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nipsnap3bQ9CQE1 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.83□□□□□ -0.2
Nipsnap3bQ9CQE1 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.83□□□□□ -0.2
Nipsnap3bQ9CQE1 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.83□□□□□ -0.2
Nipsnap3bQ9CQE1 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nipsnap3bQ9CQE1 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nipsnap3bQ9CQE1 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nipsnap3bQ9CQE1 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nipsnap3bQ9CQE1 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 188.4 ms