Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Krt88Q9CPR6 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Krt88Q9CPR6 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.68□□□□□ -0.38
Krt88Q9CPR6 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Krt88Q9CPR6 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Krt88Q9CPR6 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Krt88Q9CPR6 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Krt88Q9CPR6 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Krt88Q9CPR6 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Krt88Q9CPR6 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Krt88Q9CPR6 Gm27459-201ENSMUST00000184860 107 ntBASIC12.68□□□□□ -0.38
Krt88Q9CPR6 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC12.68□□□□□ -0.38
Krt88Q9CPR6 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC12.68□□□□□ -0.38
Krt88Q9CPR6 Gm6376-201ENSMUST00000209407 580 ntBASIC12.68□□□□□ -0.38
Krt88Q9CPR6 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Krt88Q9CPR6 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.68□□□□□ -0.38
Krt88Q9CPR6 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Krt88Q9CPR6 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.68□□□□□ -0.38
Krt88Q9CPR6 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Krt88Q9CPR6 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Krt88Q9CPR6 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Krt88Q9CPR6 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Krt88Q9CPR6 AC122901.1-201ENSMUST00000214203 1790 ntBASIC12.68□□□□□ -0.38
Krt88Q9CPR6 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Krt88Q9CPR6 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Krt88Q9CPR6 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Krt88Q9CPR6 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Krt88Q9CPR6 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Krt88Q9CPR6 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Krt88Q9CPR6 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.68□□□□□ -0.38
Krt88Q9CPR6 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Krt88Q9CPR6 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Krt88Q9CPR6 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Krt88Q9CPR6 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.67□□□□□ -0.38
Krt88Q9CPR6 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Krt88Q9CPR6 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Krt88Q9CPR6 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Krt88Q9CPR6 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Krt88Q9CPR6 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Krt88Q9CPR6 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Krt88Q9CPR6 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.67□□□□□ -0.38
Krt88Q9CPR6 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Krt88Q9CPR6 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.67□□□□□ -0.38
Krt88Q9CPR6 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Krt88Q9CPR6 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC12.67□□□□□ -0.38
Krt88Q9CPR6 Gm10275-202ENSMUST00000168697 495 ntBASIC12.67□□□□□ -0.38
Krt88Q9CPR6 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Krt88Q9CPR6 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Krt88Q9CPR6 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.67□□□□□ -0.38
Krt88Q9CPR6 Gm10154-201ENSMUST00000084445 354 ntBASIC12.67□□□□□ -0.38
Krt88Q9CPR6 Gm10275-201ENSMUST00000092620 635 ntBASIC12.67□□□□□ -0.38
Krt88Q9CPR6 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Krt88Q9CPR6 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.67□□□□□ -0.38
Krt88Q9CPR6 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.67□□□□□ -0.38
Krt88Q9CPR6 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Krt88Q9CPR6 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Krt88Q9CPR6 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Krt88Q9CPR6 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Krt88Q9CPR6 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Krt88Q9CPR6 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.67□□□□□ -0.38
Krt88Q9CPR6 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.67□□□□□ -0.38
Krt88Q9CPR6 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Krt88Q9CPR6 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Krt88Q9CPR6 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Krt88Q9CPR6 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Krt88Q9CPR6 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Krt88Q9CPR6 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Krt88Q9CPR6 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Krt88Q9CPR6 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Krt88Q9CPR6 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.66□□□□□ -0.38
Krt88Q9CPR6 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Krt88Q9CPR6 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Krt88Q9CPR6 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Krt88Q9CPR6 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Krt88Q9CPR6 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Krt88Q9CPR6 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Krt88Q9CPR6 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Krt88Q9CPR6 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Krt88Q9CPR6 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Krt88Q9CPR6 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.66□□□□□ -0.38
Krt88Q9CPR6 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC12.66□□□□□ -0.38
Krt88Q9CPR6 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.66□□□□□ -0.38
Krt88Q9CPR6 Gm5864-201ENSMUST00000202263 970 ntBASIC12.66□□□□□ -0.38
Krt88Q9CPR6 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Krt88Q9CPR6 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.66□□□□□ -0.38
Krt88Q9CPR6 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Krt88Q9CPR6 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.66□□□□□ -0.38
Krt88Q9CPR6 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Krt88Q9CPR6 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Krt88Q9CPR6 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Krt88Q9CPR6 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Krt88Q9CPR6 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Krt88Q9CPR6 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Krt88Q9CPR6 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Krt88Q9CPR6 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Krt88Q9CPR6 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Krt88Q9CPR6 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Krt88Q9CPR6 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Krt88Q9CPR6 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Krt88Q9CPR6 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms