Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim8Q99PJ2 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim8Q99PJ2 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
Trim8Q99PJ2 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim8Q99PJ2 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim8Q99PJ2 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim8Q99PJ2 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim8Q99PJ2 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim8Q99PJ2 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim8Q99PJ2 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim8Q99PJ2 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim8Q99PJ2 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim8Q99PJ2 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.78□□□□□ -0.2
Trim8Q99PJ2 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trim8Q99PJ2 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim8Q99PJ2 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim8Q99PJ2 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Trim8Q99PJ2 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim8Q99PJ2 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim8Q99PJ2 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trim8Q99PJ2 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim8Q99PJ2 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trim8Q99PJ2 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Trim8Q99PJ2 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Trim8Q99PJ2 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.77□□□□□ -0.21
Trim8Q99PJ2 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim8Q99PJ2 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim8Q99PJ2 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim8Q99PJ2 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim8Q99PJ2 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim8Q99PJ2 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Trim8Q99PJ2 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim8Q99PJ2 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.77□□□□□ -0.21
Trim8Q99PJ2 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.77□□□□□ -0.21
Trim8Q99PJ2 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim8Q99PJ2 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.77□□□□□ -0.21
Trim8Q99PJ2 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.77□□□□□ -0.21
Trim8Q99PJ2 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.77□□□□□ -0.21
Trim8Q99PJ2 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.21
Trim8Q99PJ2 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim8Q99PJ2 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim8Q99PJ2 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim8Q99PJ2 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim8Q99PJ2 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim8Q99PJ2 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Trim8Q99PJ2 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim8Q99PJ2 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim8Q99PJ2 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.76□□□□□ -0.21
Trim8Q99PJ2 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim8Q99PJ2 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.76□□□□□ -0.21
Trim8Q99PJ2 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.76□□□□□ -0.21
Trim8Q99PJ2 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim8Q99PJ2 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim8Q99PJ2 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim8Q99PJ2 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim8Q99PJ2 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim8Q99PJ2 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim8Q99PJ2 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Trim8Q99PJ2 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Trim8Q99PJ2 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Trim8Q99PJ2 Gm8000-201ENSMUST00000188378 592 ntBASIC13.76□□□□□ -0.21
Trim8Q99PJ2 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim8Q99PJ2 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.76□□□□□ -0.21
Trim8Q99PJ2 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim8Q99PJ2 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim8Q99PJ2 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim8Q99PJ2 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim8Q99PJ2 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim8Q99PJ2 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim8Q99PJ2 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim8Q99PJ2 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trim8Q99PJ2 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trim8Q99PJ2 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trim8Q99PJ2 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim8Q99PJ2 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim8Q99PJ2 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim8Q99PJ2 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim8Q99PJ2 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim8Q99PJ2 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim8Q99PJ2 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim8Q99PJ2 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim8Q99PJ2 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim8Q99PJ2 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim8Q99PJ2 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim8Q99PJ2 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim8Q99PJ2 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim8Q99PJ2 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim8Q99PJ2 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trim8Q99PJ2 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim8Q99PJ2 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim8Q99PJ2 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Trim8Q99PJ2 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim8Q99PJ2 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.75□□□□□ -0.21
Trim8Q99PJ2 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Trim8Q99PJ2 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trim8Q99PJ2 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Trim8Q99PJ2 Gm12260-201ENSMUST00000122447 411 ntBASIC13.75□□□□□ -0.21
Trim8Q99PJ2 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.75□□□□□ -0.21
Trim8Q99PJ2 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim8Q99PJ2 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms