Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh15Q99PJ1 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh15Q99PJ1 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh15Q99PJ1 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh15Q99PJ1 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC15.53■□□□□ 0.08
Pcdh15Q99PJ1 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh15Q99PJ1 Gm23200-201ENSMUST00000104379 132 ntBASIC15.53■□□□□ 0.08
Pcdh15Q99PJ1 Gm12566-201ENSMUST00000121479 359 ntBASIC15.53■□□□□ 0.08
Pcdh15Q99PJ1 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh15Q99PJ1 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Pcdh15Q99PJ1 Gm34767-201ENSMUST00000191813 1062 ntBASIC15.53■□□□□ 0.08
Pcdh15Q99PJ1 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC15.53■□□□□ 0.08
Pcdh15Q99PJ1 Gm8959-201ENSMUST00000213150 571 ntBASIC15.53■□□□□ 0.08
Pcdh15Q99PJ1 Gm18615-201ENSMUST00000222919 1031 ntBASIC15.53■□□□□ 0.08
Pcdh15Q99PJ1 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh15Q99PJ1 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh15Q99PJ1 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh15Q99PJ1 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh15Q99PJ1 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh15Q99PJ1 AC096628.2-201ENSMUST00000225443 1413 ntBASIC15.53■□□□□ 0.08
Pcdh15Q99PJ1 Gm13665-201ENSMUST00000120830 528 ntBASIC15.53■□□□□ 0.08
Pcdh15Q99PJ1 Gm14277-201ENSMUST00000121195 360 ntBASIC15.53■□□□□ 0.08
Pcdh15Q99PJ1 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC15.53■□□□□ 0.08
Pcdh15Q99PJ1 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC15.53■□□□□ 0.08
Pcdh15Q99PJ1 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh15Q99PJ1 Dapk1-207ENSMUST00000226059 5009 ntBASIC15.53■□□□□ 0.08
Pcdh15Q99PJ1 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh15Q99PJ1 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh15Q99PJ1 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh15Q99PJ1 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh15Q99PJ1 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC15.52■□□□□ 0.08
Pcdh15Q99PJ1 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.52■□□□□ 0.08
Pcdh15Q99PJ1 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh15Q99PJ1 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC15.52■□□□□ 0.08
Pcdh15Q99PJ1 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Pcdh15Q99PJ1 Gm8584-201ENSMUST00000171982 758 ntBASIC15.52■□□□□ 0.07
Pcdh15Q99PJ1 Gm24514-201ENSMUST00000174961 285 ntBASIC15.52■□□□□ 0.07
Pcdh15Q99PJ1 AA914427-201ENSMUST00000193194 1166 ntBASIC15.52■□□□□ 0.07
Pcdh15Q99PJ1 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdh15Q99PJ1 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdh15Q99PJ1 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC15.52■□□□□ 0.07
Pcdh15Q99PJ1 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdh15Q99PJ1 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdh15Q99PJ1 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdh15Q99PJ1 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdh15Q99PJ1 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC15.52■□□□□ 0.07
Pcdh15Q99PJ1 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdh15Q99PJ1 Gm38197-201ENSMUST00000192320 2122 ntBASIC15.51■□□□□ 0.07
Pcdh15Q99PJ1 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh15Q99PJ1 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh15Q99PJ1 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh15Q99PJ1 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh15Q99PJ1 Gm8862-201ENSMUST00000198379 1346 ntBASIC15.51■□□□□ 0.07
Pcdh15Q99PJ1 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh15Q99PJ1 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh15Q99PJ1 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Pcdh15Q99PJ1 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh15Q99PJ1 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC15.51■□□□□ 0.07
Pcdh15Q99PJ1 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh15Q99PJ1 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh15Q99PJ1 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC15.51■□□□□ 0.07
Pcdh15Q99PJ1 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC15.51■□□□□ 0.07
Pcdh15Q99PJ1 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh15Q99PJ1 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Pcdh15Q99PJ1 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh15Q99PJ1 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh15Q99PJ1 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh15Q99PJ1 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh15Q99PJ1 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh15Q99PJ1 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh15Q99PJ1 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh15Q99PJ1 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC15.51■□□□□ 0.07
Pcdh15Q99PJ1 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh15Q99PJ1 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh15Q99PJ1 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh15Q99PJ1 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh15Q99PJ1 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh15Q99PJ1 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh15Q99PJ1 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh15Q99PJ1 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh15Q99PJ1 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC15.51■□□□□ 0.07
Pcdh15Q99PJ1 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh15Q99PJ1 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh15Q99PJ1 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh15Q99PJ1 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh15Q99PJ1 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh15Q99PJ1 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh15Q99PJ1 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh15Q99PJ1 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh15Q99PJ1 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC15.5■□□□□ 0.07
Pcdh15Q99PJ1 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Pcdh15Q99PJ1 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh15Q99PJ1 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh15Q99PJ1 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh15Q99PJ1 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh15Q99PJ1 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.5■□□□□ 0.07
Pcdh15Q99PJ1 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh15Q99PJ1 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
Pcdh15Q99PJ1 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
Pcdh15Q99PJ1 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms