Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rtn4Q99P72 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC18.18■□□□□ 0.5
Rtn4Q99P72 Gm18766-201ENSMUST00000189811 808 ntBASIC18.18■□□□□ 0.5
Rtn4Q99P72 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rtn4Q99P72 AC153899.1-201ENSMUST00000214092 1117 ntBASIC18.18■□□□□ 0.5
Rtn4Q99P72 AC125206.2-201ENSMUST00000217454 574 ntBASIC18.18■□□□□ 0.5
Rtn4Q99P72 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rtn4Q99P72 AC158529.1-201ENSMUST00000223618 239 ntBASIC18.18■□□□□ 0.5
Rtn4Q99P72 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtn4Q99P72 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtn4Q99P72 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtn4Q99P72 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC18.18■□□□□ 0.5
Rtn4Q99P72 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtn4Q99P72 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtn4Q99P72 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtn4Q99P72 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Rtn4Q99P72 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Rtn4Q99P72 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC18.18■□□□□ 0.5
Rtn4Q99P72 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Rtn4Q99P72 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtn4Q99P72 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn4Q99P72 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn4Q99P72 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Rtn4Q99P72 AC121805.2-201ENSMUST00000218808 2538 ntBASIC18.17■□□□□ 0.5
Rtn4Q99P72 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn4Q99P72 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC18.17■□□□□ 0.5
Rtn4Q99P72 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn4Q99P72 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn4Q99P72 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn4Q99P72 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Rtn4Q99P72 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn4Q99P72 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
Rtn4Q99P72 Gm15693-201ENSMUST00000120470 637 ntBASIC18.17■□□□□ 0.5
Rtn4Q99P72 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC18.17■□□□□ 0.5
Rtn4Q99P72 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC18.17■□□□□ 0.5
Rtn4Q99P72 Gm23673-201ENSMUST00000157474 298 ntBASIC18.17■□□□□ 0.5
Rtn4Q99P72 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn4Q99P72 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC18.17■□□□□ 0.5
Rtn4Q99P72 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn4Q99P72 Gm37631-201ENSMUST00000192275 364 ntBASIC18.17■□□□□ 0.5
Rtn4Q99P72 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Rtn4Q99P72 Gm18871-201ENSMUST00000218655 745 ntBASIC18.17■□□□□ 0.5
Rtn4Q99P72 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC18.17■□□□□ 0.5
Rtn4Q99P72 AC165260.4-201ENSMUST00000225924 724 ntBASIC18.17■□□□□ 0.5
Rtn4Q99P72 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn4Q99P72 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Rtn4Q99P72 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC18.17■□□□□ 0.5
Rtn4Q99P72 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn4Q99P72 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn4Q99P72 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn4Q99P72 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Rtn4Q99P72 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Rtn4Q99P72 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn4Q99P72 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC18.17■□□□□ 0.5
Rtn4Q99P72 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn4Q99P72 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Rtn4Q99P72 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC18.17■□□□□ 0.5
Rtn4Q99P72 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn4Q99P72 Gm27528-202ENSMUST00000222916 2012 ntBASIC18.16■□□□□ 0.5
Rtn4Q99P72 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn4Q99P72 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn4Q99P72 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC18.16■□□□□ 0.5
Rtn4Q99P72 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn4Q99P72 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn4Q99P72 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn4Q99P72 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC18.16■□□□□ 0.5
Rtn4Q99P72 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn4Q99P72 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn4Q99P72 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn4Q99P72 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Rtn4Q99P72 Gm45003-201ENSMUST00000205875 2158 ntBASIC18.16■□□□□ 0.5
Rtn4Q99P72 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn4Q99P72 Gm9440-201ENSMUST00000119667 539 ntBASIC18.16■□□□□ 0.5
Rtn4Q99P72 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Rtn4Q99P72 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
Rtn4Q99P72 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn4Q99P72 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
Rtn4Q99P72 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn4Q99P72 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn4Q99P72 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC18.16■□□□□ 0.5
Rtn4Q99P72 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC18.16■□□□□ 0.5
Rtn4Q99P72 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC18.16■□□□□ 0.5
Rtn4Q99P72 Gm26736-201ENSMUST00000180425 1236 ntBASIC18.16■□□□□ 0.5
Rtn4Q99P72 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC18.16■□□□□ 0.5
Rtn4Q99P72 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC18.16■□□□□ 0.5
Rtn4Q99P72 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn4Q99P72 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Rtn4Q99P72 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC18.16■□□□□ 0.5
Rtn4Q99P72 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn4Q99P72 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn4Q99P72 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn4Q99P72 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn4Q99P72 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn4Q99P72 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn4Q99P72 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn4Q99P72 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC18.15■□□□□ 0.5
Rtn4Q99P72 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn4Q99P72 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Rtn4Q99P72 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn4Q99P72 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms