Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Gtf2ird2Q99NI3 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Gtf2ird2Q99NI3 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gtf2ird2Q99NI3 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.45□□□□□ -0.1
Gtf2ird2Q99NI3 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Gtf2ird2Q99NI3 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gtf2ird2Q99NI3 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gtf2ird2Q99NI3 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gtf2ird2Q99NI3 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.45□□□□□ -0.1
Gtf2ird2Q99NI3 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Gtf2ird2Q99NI3 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gtf2ird2Q99NI3 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.45□□□□□ -0.1
Gtf2ird2Q99NI3 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Gtf2ird2Q99NI3 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Gtf2ird2Q99NI3 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.45□□□□□ -0.1
Gtf2ird2Q99NI3 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.45□□□□□ -0.1
Gtf2ird2Q99NI3 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.45□□□□□ -0.1
Gtf2ird2Q99NI3 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Gtf2ird2Q99NI3 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.45□□□□□ -0.1
Gtf2ird2Q99NI3 Gm7730-201ENSMUST00000212486 454 ntBASIC14.45□□□□□ -0.1
Gtf2ird2Q99NI3 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gtf2ird2Q99NI3 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.45□□□□□ -0.1
Gtf2ird2Q99NI3 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gtf2ird2Q99NI3 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gtf2ird2Q99NI3 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Gtf2ird2Q99NI3 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gtf2ird2Q99NI3 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gtf2ird2Q99NI3 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gtf2ird2Q99NI3 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gtf2ird2Q99NI3 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.45□□□□□ -0.1
Gtf2ird2Q99NI3 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gtf2ird2Q99NI3 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gtf2ird2Q99NI3 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Gtf2ird2Q99NI3 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Gtf2ird2Q99NI3 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Gtf2ird2Q99NI3 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gtf2ird2Q99NI3 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gtf2ird2Q99NI3 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Gtf2ird2Q99NI3 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Gtf2ird2Q99NI3 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Gtf2ird2Q99NI3 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gtf2ird2Q99NI3 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gtf2ird2Q99NI3 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gtf2ird2Q99NI3 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Gtf2ird2Q99NI3 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.44□□□□□ -0.1
Gtf2ird2Q99NI3 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Gtf2ird2Q99NI3 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Gtf2ird2Q99NI3 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gtf2ird2Q99NI3 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Gtf2ird2Q99NI3 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gtf2ird2Q99NI3 Gm15321-201ENSMUST00000121290 288 ntBASIC14.44□□□□□ -0.1
Gtf2ird2Q99NI3 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.44□□□□□ -0.1
Gtf2ird2Q99NI3 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.44□□□□□ -0.1
Gtf2ird2Q99NI3 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Gtf2ird2Q99NI3 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gtf2ird2Q99NI3 Gm29667-201ENSMUST00000190817 490 ntBASIC14.44□□□□□ -0.1
Gtf2ird2Q99NI3 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Gtf2ird2Q99NI3 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gtf2ird2Q99NI3 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gtf2ird2Q99NI3 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gtf2ird2Q99NI3 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gtf2ird2Q99NI3 Gm20445-201ENSMUST00000061905 565 ntBASIC14.44□□□□□ -0.1
Gtf2ird2Q99NI3 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gtf2ird2Q99NI3 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gtf2ird2Q99NI3 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Gtf2ird2Q99NI3 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gtf2ird2Q99NI3 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gtf2ird2Q99NI3 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gtf2ird2Q99NI3 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gtf2ird2Q99NI3 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gtf2ird2Q99NI3 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gtf2ird2Q99NI3 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Gtf2ird2Q99NI3 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.44□□□□□ -0.1
Gtf2ird2Q99NI3 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gtf2ird2Q99NI3 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gtf2ird2Q99NI3 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gtf2ird2Q99NI3 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gtf2ird2Q99NI3 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gtf2ird2Q99NI3 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gtf2ird2Q99NI3 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gtf2ird2Q99NI3 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gtf2ird2Q99NI3 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gtf2ird2Q99NI3 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.43□□□□□ -0.1
Gtf2ird2Q99NI3 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Gtf2ird2Q99NI3 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Gtf2ird2Q99NI3 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gtf2ird2Q99NI3 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Gtf2ird2Q99NI3 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Gtf2ird2Q99NI3 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gtf2ird2Q99NI3 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gtf2ird2Q99NI3 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gtf2ird2Q99NI3 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gtf2ird2Q99NI3 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Gtf2ird2Q99NI3 Gm16215-201ENSMUST00000161990 637 ntBASIC14.43□□□□□ -0.1
Gtf2ird2Q99NI3 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.43□□□□□ -0.1
Gtf2ird2Q99NI3 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.43□□□□□ -0.1
Gtf2ird2Q99NI3 Gm5425-201ENSMUST00000214125 459 ntBASIC14.43□□□□□ -0.1
Gtf2ird2Q99NI3 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.43□□□□□ -0.1
Gtf2ird2Q99NI3 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.43□□□□□ -0.1
Gtf2ird2Q99NI3 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms