Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rnf111Q99ML9 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.23
Rnf111Q99ML9 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Rnf111Q99ML9 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf111Q99ML9 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Rnf111Q99ML9 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf111Q99ML9 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Rnf111Q99ML9 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf111Q99ML9 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf111Q99ML9 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf111Q99ML9 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf111Q99ML9 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf111Q99ML9 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf111Q99ML9 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf111Q99ML9 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Rnf111Q99ML9 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf111Q99ML9 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf111Q99ML9 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf111Q99ML9 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Rnf111Q99ML9 Mir1895-201ENSMUST00000122615 79 ntBASIC13.64□□□□□ -0.23
Rnf111Q99ML9 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.64□□□□□ -0.23
Rnf111Q99ML9 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf111Q99ML9 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Rnf111Q99ML9 Gm18057-201ENSMUST00000208220 503 ntBASIC13.64□□□□□ -0.23
Rnf111Q99ML9 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.64□□□□□ -0.23
Rnf111Q99ML9 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Rnf111Q99ML9 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.64□□□□□ -0.23
Rnf111Q99ML9 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.64□□□□□ -0.23
Rnf111Q99ML9 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.64□□□□□ -0.23
Rnf111Q99ML9 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf111Q99ML9 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.64□□□□□ -0.23
Rnf111Q99ML9 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf111Q99ML9 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf111Q99ML9 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf111Q99ML9 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Rnf111Q99ML9 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.64□□□□□ -0.23
Rnf111Q99ML9 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf111Q99ML9 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf111Q99ML9 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf111Q99ML9 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf111Q99ML9 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf111Q99ML9 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf111Q99ML9 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf111Q99ML9 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.64□□□□□ -0.23
Rnf111Q99ML9 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf111Q99ML9 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf111Q99ML9 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Rnf111Q99ML9 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf111Q99ML9 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf111Q99ML9 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf111Q99ML9 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.63□□□□□ -0.23
Rnf111Q99ML9 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Rnf111Q99ML9 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.63□□□□□ -0.23
Rnf111Q99ML9 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf111Q99ML9 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf111Q99ML9 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf111Q99ML9 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf111Q99ML9 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf111Q99ML9 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Rnf111Q99ML9 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.63□□□□□ -0.23
Rnf111Q99ML9 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.63□□□□□ -0.23
Rnf111Q99ML9 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf111Q99ML9 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.63□□□□□ -0.23
Rnf111Q99ML9 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Rnf111Q99ML9 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf111Q99ML9 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf111Q99ML9 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf111Q99ML9 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf111Q99ML9 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Rnf111Q99ML9 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Rnf111Q99ML9 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf111Q99ML9 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.63□□□□□ -0.23
Rnf111Q99ML9 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf111Q99ML9 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf111Q99ML9 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Rnf111Q99ML9 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
Rnf111Q99ML9 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf111Q99ML9 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf111Q99ML9 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.62□□□□□ -0.23
Rnf111Q99ML9 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf111Q99ML9 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.62□□□□□ -0.23
Rnf111Q99ML9 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf111Q99ML9 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf111Q99ML9 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf111Q99ML9 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Rnf111Q99ML9 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf111Q99ML9 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Rnf111Q99ML9 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.62□□□□□ -0.23
Rnf111Q99ML9 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf111Q99ML9 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.62□□□□□ -0.23
Rnf111Q99ML9 Gm8584-201ENSMUST00000171982 758 ntBASIC13.62□□□□□ -0.23
Rnf111Q99ML9 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Rnf111Q99ML9 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf111Q99ML9 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf111Q99ML9 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf111Q99ML9 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf111Q99ML9 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf111Q99ML9 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf111Q99ML9 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf111Q99ML9 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms