Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx6-1Q99MA9 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx6-1Q99MA9 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.14□□□□□ -0.31
Nkx6-1Q99MA9 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx6-1Q99MA9 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx6-1Q99MA9 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx6-1Q99MA9 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx6-1Q99MA9 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx6-1Q99MA9 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Nkx6-1Q99MA9 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx6-1Q99MA9 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Nkx6-1Q99MA9 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.14□□□□□ -0.31
Nkx6-1Q99MA9 Gm24644-201ENSMUST00000157114 139 ntBASIC13.14□□□□□ -0.31
Nkx6-1Q99MA9 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.14□□□□□ -0.31
Nkx6-1Q99MA9 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.14□□□□□ -0.31
Nkx6-1Q99MA9 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx6-1Q99MA9 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC13.14□□□□□ -0.31
Nkx6-1Q99MA9 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx6-1Q99MA9 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.14□□□□□ -0.31
Nkx6-1Q99MA9 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx6-1Q99MA9 Gm10012-201ENSMUST00000078252 192 ntBASIC13.14□□□□□ -0.31
Nkx6-1Q99MA9 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx6-1Q99MA9 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx6-1Q99MA9 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx6-1Q99MA9 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx6-1Q99MA9 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx6-1Q99MA9 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx6-1Q99MA9 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx6-1Q99MA9 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx6-1Q99MA9 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.14□□□□□ -0.31
Nkx6-1Q99MA9 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Nkx6-1Q99MA9 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx6-1Q99MA9 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.14□□□□□ -0.31
Nkx6-1Q99MA9 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx6-1Q99MA9 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx6-1Q99MA9 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Nkx6-1Q99MA9 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx6-1Q99MA9 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx6-1Q99MA9 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx6-1Q99MA9 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx6-1Q99MA9 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx6-1Q99MA9 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx6-1Q99MA9 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx6-1Q99MA9 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx6-1Q99MA9 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx6-1Q99MA9 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx6-1Q99MA9 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Nkx6-1Q99MA9 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx6-1Q99MA9 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx6-1Q99MA9 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx6-1Q99MA9 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx6-1Q99MA9 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.13□□□□□ -0.31
Nkx6-1Q99MA9 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx6-1Q99MA9 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx6-1Q99MA9 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
Nkx6-1Q99MA9 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.13□□□□□ -0.31
Nkx6-1Q99MA9 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.13□□□□□ -0.31
Nkx6-1Q99MA9 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.13□□□□□ -0.31
Nkx6-1Q99MA9 Gm18054-201ENSMUST00000207539 555 ntBASIC13.13□□□□□ -0.31
Nkx6-1Q99MA9 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.13□□□□□ -0.31
Nkx6-1Q99MA9 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx6-1Q99MA9 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Nkx6-1Q99MA9 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx6-1Q99MA9 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx6-1Q99MA9 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx6-1Q99MA9 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Nkx6-1Q99MA9 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx6-1Q99MA9 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx6-1Q99MA9 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx6-1Q99MA9 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.13□□□□□ -0.31
Nkx6-1Q99MA9 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.13□□□□□ -0.31
Nkx6-1Q99MA9 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx6-1Q99MA9 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.12□□□□□ -0.31
Nkx6-1Q99MA9 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx6-1Q99MA9 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx6-1Q99MA9 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx6-1Q99MA9 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx6-1Q99MA9 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx6-1Q99MA9 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx6-1Q99MA9 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx6-1Q99MA9 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx6-1Q99MA9 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Nkx6-1Q99MA9 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx6-1Q99MA9 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx6-1Q99MA9 Gm14723-201ENSMUST00000118686 215 ntBASIC13.12□□□□□ -0.31
Nkx6-1Q99MA9 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.12□□□□□ -0.31
Nkx6-1Q99MA9 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx6-1Q99MA9 Gm6983-201ENSMUST00000214912 628 ntBASIC13.12□□□□□ -0.31
Nkx6-1Q99MA9 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.12□□□□□ -0.31
Nkx6-1Q99MA9 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.12□□□□□ -0.31
Nkx6-1Q99MA9 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx6-1Q99MA9 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx6-1Q99MA9 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Nkx6-1Q99MA9 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx6-1Q99MA9 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Nkx6-1Q99MA9 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx6-1Q99MA9 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Nkx6-1Q99MA9 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx6-1Q99MA9 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Nkx6-1Q99MA9 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms