Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp1b1Q99LU0 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp1b1Q99LU0 Gm14701-201ENSMUST00000117156 348 ntBASIC13.31□□□□□ -0.28
Chmp1b1Q99LU0 Gm13365-201ENSMUST00000121188 973 ntBASIC13.31□□□□□ -0.28
Chmp1b1Q99LU0 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp1b1Q99LU0 Gm18889-201ENSMUST00000174284 929 ntBASIC13.31□□□□□ -0.28
Chmp1b1Q99LU0 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp1b1Q99LU0 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.31□□□□□ -0.28
Chmp1b1Q99LU0 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp1b1Q99LU0 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Chmp1b1Q99LU0 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp1b1Q99LU0 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp1b1Q99LU0 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp1b1Q99LU0 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp1b1Q99LU0 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp1b1Q99LU0 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.31□□□□□ -0.28
Chmp1b1Q99LU0 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp1b1Q99LU0 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp1b1Q99LU0 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp1b1Q99LU0 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp1b1Q99LU0 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp1b1Q99LU0 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp1b1Q99LU0 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp1b1Q99LU0 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp1b1Q99LU0 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Chmp1b1Q99LU0 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp1b1Q99LU0 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Chmp1b1Q99LU0 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp1b1Q99LU0 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp1b1Q99LU0 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.3□□□□□ -0.28
Chmp1b1Q99LU0 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp1b1Q99LU0 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp1b1Q99LU0 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp1b1Q99LU0 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp1b1Q99LU0 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp1b1Q99LU0 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp1b1Q99LU0 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Chmp1b1Q99LU0 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp1b1Q99LU0 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.3□□□□□ -0.28
Chmp1b1Q99LU0 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Chmp1b1Q99LU0 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Chmp1b1Q99LU0 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp1b1Q99LU0 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp1b1Q99LU0 Gm2810-201ENSMUST00000118681 990 ntBASIC13.3□□□□□ -0.28
Chmp1b1Q99LU0 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp1b1Q99LU0 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.3□□□□□ -0.28
Chmp1b1Q99LU0 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp1b1Q99LU0 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.3□□□□□ -0.28
Chmp1b1Q99LU0 Chchd1-203ENSMUST00000224633 557 ntBASIC13.3□□□□□ -0.28
Chmp1b1Q99LU0 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp1b1Q99LU0 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp1b1Q99LU0 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp1b1Q99LU0 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp1b1Q99LU0 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.3□□□□□ -0.28
Chmp1b1Q99LU0 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.3□□□□□ -0.28
Chmp1b1Q99LU0 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp1b1Q99LU0 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp1b1Q99LU0 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp1b1Q99LU0 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp1b1Q99LU0 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp1b1Q99LU0 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Chmp1b1Q99LU0 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp1b1Q99LU0 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp1b1Q99LU0 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Chmp1b1Q99LU0 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp1b1Q99LU0 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.29□□□□□ -0.28
Chmp1b1Q99LU0 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp1b1Q99LU0 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.29□□□□□ -0.28
Chmp1b1Q99LU0 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.29□□□□□ -0.28
Chmp1b1Q99LU0 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.29□□□□□ -0.28
Chmp1b1Q99LU0 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp1b1Q99LU0 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp1b1Q99LU0 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp1b1Q99LU0 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp1b1Q99LU0 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp1b1Q99LU0 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp1b1Q99LU0 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.29□□□□□ -0.28
Chmp1b1Q99LU0 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp1b1Q99LU0 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Chmp1b1Q99LU0 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp1b1Q99LU0 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp1b1Q99LU0 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp1b1Q99LU0 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.29□□□□□ -0.28
Chmp1b1Q99LU0 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp1b1Q99LU0 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Chmp1b1Q99LU0 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp1b1Q99LU0 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp1b1Q99LU0 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Chmp1b1Q99LU0 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.29□□□□□ -0.28
Chmp1b1Q99LU0 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.29□□□□□ -0.28
Chmp1b1Q99LU0 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.29□□□□□ -0.28
Chmp1b1Q99LU0 Gm43125-201ENSMUST00000201724 730 ntBASIC13.29□□□□□ -0.28
Chmp1b1Q99LU0 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp1b1Q99LU0 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.29□□□□□ -0.28
Chmp1b1Q99LU0 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Chmp1b1Q99LU0 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Chmp1b1Q99LU0 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp1b1Q99LU0 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp1b1Q99LU0 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp1b1Q99LU0 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms