Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.74□□□□□ -0.05
Clp1Q99LI9 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clp1Q99LI9 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
Clp1Q99LI9 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Clp1Q99LI9 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Clp1Q99LI9 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clp1Q99LI9 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clp1Q99LI9 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clp1Q99LI9 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC14.74□□□□□ -0.05
Clp1Q99LI9 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
Clp1Q99LI9 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Clp1Q99LI9 Gm42550-201ENSMUST00000201553 960 ntBASIC14.74□□□□□ -0.05
Clp1Q99LI9 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
Clp1Q99LI9 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC14.74□□□□□ -0.05
Clp1Q99LI9 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC14.74□□□□□ -0.05
Clp1Q99LI9 AC154276.1-201ENSMUST00000228874 1299 ntBASIC14.74□□□□□ -0.05
Clp1Q99LI9 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Clp1Q99LI9 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.74□□□□□ -0.05
Clp1Q99LI9 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clp1Q99LI9 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clp1Q99LI9 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clp1Q99LI9 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clp1Q99LI9 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clp1Q99LI9 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clp1Q99LI9 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clp1Q99LI9 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clp1Q99LI9 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clp1Q99LI9 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.74□□□□□ -0.05
Clp1Q99LI9 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Clp1Q99LI9 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clp1Q99LI9 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
Clp1Q99LI9 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Clp1Q99LI9 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
Clp1Q99LI9 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clp1Q99LI9 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Clp1Q99LI9 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clp1Q99LI9 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clp1Q99LI9 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
Clp1Q99LI9 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clp1Q99LI9 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clp1Q99LI9 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clp1Q99LI9 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.73□□□□□ -0.05
Clp1Q99LI9 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clp1Q99LI9 Mir698-201ENSMUST00000102164 109 ntBASIC14.73□□□□□ -0.05
Clp1Q99LI9 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clp1Q99LI9 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC14.73□□□□□ -0.05
Clp1Q99LI9 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Clp1Q99LI9 Gm5687-201ENSMUST00000118252 640 ntBASIC14.73□□□□□ -0.05
Clp1Q99LI9 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC14.73□□□□□ -0.05
Clp1Q99LI9 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Clp1Q99LI9 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC14.73□□□□□ -0.05
Clp1Q99LI9 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Clp1Q99LI9 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clp1Q99LI9 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Clp1Q99LI9 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clp1Q99LI9 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clp1Q99LI9 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clp1Q99LI9 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clp1Q99LI9 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clp1Q99LI9 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clp1Q99LI9 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.73□□□□□ -0.05
Clp1Q99LI9 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Clp1Q99LI9 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clp1Q99LI9 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clp1Q99LI9 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
Clp1Q99LI9 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clp1Q99LI9 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clp1Q99LI9 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
Clp1Q99LI9 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clp1Q99LI9 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Clp1Q99LI9 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Clp1Q99LI9 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Clp1Q99LI9 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clp1Q99LI9 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Clp1Q99LI9 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Clp1Q99LI9 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.72□□□□□ -0.05
Clp1Q99LI9 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clp1Q99LI9 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clp1Q99LI9 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Clp1Q99LI9 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Clp1Q99LI9 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clp1Q99LI9 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clp1Q99LI9 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clp1Q99LI9 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Clp1Q99LI9 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clp1Q99LI9 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clp1Q99LI9 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Clp1Q99LI9 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Clp1Q99LI9 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Clp1Q99LI9 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Clp1Q99LI9 Gm19184-201ENSMUST00000196798 928 ntBASIC14.72□□□□□ -0.05
Clp1Q99LI9 Gm29705-201ENSMUST00000212598 474 ntBASIC14.72□□□□□ -0.05
Clp1Q99LI9 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.72□□□□□ -0.05
Clp1Q99LI9 AC155237.1-201ENSMUST00000226196 1279 ntBASIC14.72□□□□□ -0.05
Clp1Q99LI9 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clp1Q99LI9 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clp1Q99LI9 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clp1Q99LI9 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Clp1Q99LI9 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clp1Q99LI9 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms