Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cstf3Q99LI7 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Cstf3Q99LI7 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cstf3Q99LI7 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cstf3Q99LI7 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cstf3Q99LI7 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cstf3Q99LI7 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cstf3Q99LI7 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.6□□□□□ -0.23
Cstf3Q99LI7 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cstf3Q99LI7 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Cstf3Q99LI7 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cstf3Q99LI7 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cstf3Q99LI7 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cstf3Q99LI7 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cstf3Q99LI7 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Cstf3Q99LI7 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cstf3Q99LI7 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Cstf3Q99LI7 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cstf3Q99LI7 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Cstf3Q99LI7 Gm15957-201ENSMUST00000118893 974 ntBASIC13.6□□□□□ -0.23
Cstf3Q99LI7 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.6□□□□□ -0.23
Cstf3Q99LI7 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cstf3Q99LI7 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cstf3Q99LI7 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.6□□□□□ -0.23
Cstf3Q99LI7 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cstf3Q99LI7 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.6□□□□□ -0.23
Cstf3Q99LI7 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cstf3Q99LI7 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.6□□□□□ -0.23
Cstf3Q99LI7 Gm44608-201ENSMUST00000206827 855 ntBASIC13.6□□□□□ -0.23
Cstf3Q99LI7 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Cstf3Q99LI7 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cstf3Q99LI7 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cstf3Q99LI7 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Cstf3Q99LI7 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cstf3Q99LI7 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Cstf3Q99LI7 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Cstf3Q99LI7 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cstf3Q99LI7 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cstf3Q99LI7 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Cstf3Q99LI7 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cstf3Q99LI7 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.59□□□□□ -0.23
Cstf3Q99LI7 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Cstf3Q99LI7 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.59□□□□□ -0.23
Cstf3Q99LI7 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cstf3Q99LI7 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cstf3Q99LI7 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cstf3Q99LI7 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cstf3Q99LI7 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cstf3Q99LI7 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cstf3Q99LI7 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cstf3Q99LI7 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cstf3Q99LI7 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.59□□□□□ -0.23
Cstf3Q99LI7 Gm18889-201ENSMUST00000174284 929 ntBASIC13.59□□□□□ -0.23
Cstf3Q99LI7 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cstf3Q99LI7 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.59□□□□□ -0.23
Cstf3Q99LI7 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cstf3Q99LI7 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cstf3Q99LI7 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cstf3Q99LI7 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cstf3Q99LI7 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cstf3Q99LI7 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cstf3Q99LI7 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cstf3Q99LI7 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cstf3Q99LI7 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.59□□□□□ -0.23
Cstf3Q99LI7 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Cstf3Q99LI7 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cstf3Q99LI7 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cstf3Q99LI7 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cstf3Q99LI7 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cstf3Q99LI7 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.58□□□□□ -0.23
Cstf3Q99LI7 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cstf3Q99LI7 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cstf3Q99LI7 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cstf3Q99LI7 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.58□□□□□ -0.23
Cstf3Q99LI7 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cstf3Q99LI7 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.58□□□□□ -0.24
Cstf3Q99LI7 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cstf3Q99LI7 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cstf3Q99LI7 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cstf3Q99LI7 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.58□□□□□ -0.24
Cstf3Q99LI7 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cstf3Q99LI7 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cstf3Q99LI7 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cstf3Q99LI7 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cstf3Q99LI7 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cstf3Q99LI7 Gm6222-201ENSMUST00000120787 396 ntBASIC13.58□□□□□ -0.24
Cstf3Q99LI7 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cstf3Q99LI7 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cstf3Q99LI7 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.58□□□□□ -0.24
Cstf3Q99LI7 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.58□□□□□ -0.24
Cstf3Q99LI7 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.58□□□□□ -0.24
Cstf3Q99LI7 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cstf3Q99LI7 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cstf3Q99LI7 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cstf3Q99LI7 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cstf3Q99LI7 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Cstf3Q99LI7 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cstf3Q99LI7 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Cstf3Q99LI7 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cstf3Q99LI7 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms