Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lims1Q99JW4 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC12.81□□□□□ -0.36
Lims1Q99JW4 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lims1Q99JW4 Gm18737-201ENSMUST00000173594 937 ntBASIC12.81□□□□□ -0.36
Lims1Q99JW4 Gm24513-201ENSMUST00000174964 138 ntBASIC12.81□□□□□ -0.36
Lims1Q99JW4 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Lims1Q99JW4 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12.81□□□□□ -0.36
Lims1Q99JW4 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lims1Q99JW4 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC12.81□□□□□ -0.36
Lims1Q99JW4 Gm45612-201ENSMUST00000211320 160 ntBASIC12.81□□□□□ -0.36
Lims1Q99JW4 AC090659.1-201ENSMUST00000224334 768 ntBASIC12.81□□□□□ -0.36
Lims1Q99JW4 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lims1Q99JW4 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lims1Q99JW4 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lims1Q99JW4 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lims1Q99JW4 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Lims1Q99JW4 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Lims1Q99JW4 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lims1Q99JW4 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lims1Q99JW4 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.81□□□□□ -0.36
Lims1Q99JW4 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lims1Q99JW4 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Lims1Q99JW4 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Lims1Q99JW4 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lims1Q99JW4 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.8□□□□□ -0.36
Lims1Q99JW4 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Lims1Q99JW4 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Lims1Q99JW4 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lims1Q99JW4 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lims1Q99JW4 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lims1Q99JW4 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lims1Q99JW4 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lims1Q99JW4 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lims1Q99JW4 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.8□□□□□ -0.36
Lims1Q99JW4 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Lims1Q99JW4 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lims1Q99JW4 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Lims1Q99JW4 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lims1Q99JW4 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lims1Q99JW4 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lims1Q99JW4 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lims1Q99JW4 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lims1Q99JW4 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Lims1Q99JW4 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lims1Q99JW4 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC12.8□□□□□ -0.36
Lims1Q99JW4 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.8□□□□□ -0.36
Lims1Q99JW4 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC12.8□□□□□ -0.36
Lims1Q99JW4 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.8□□□□□ -0.36
Lims1Q99JW4 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC12.8□□□□□ -0.36
Lims1Q99JW4 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC12.8□□□□□ -0.36
Lims1Q99JW4 Gm27397-201ENSMUST00000184997 107 ntBASIC12.8□□□□□ -0.36
Lims1Q99JW4 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.8□□□□□ -0.36
Lims1Q99JW4 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lims1Q99JW4 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.8□□□□□ -0.36
Lims1Q99JW4 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.8□□□□□ -0.36
Lims1Q99JW4 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lims1Q99JW4 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lims1Q99JW4 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lims1Q99JW4 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Lims1Q99JW4 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lims1Q99JW4 Acot6-202ENSMUST00000222921 3622 ntBASIC12.8□□□□□ -0.36
Lims1Q99JW4 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lims1Q99JW4 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Lims1Q99JW4 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lims1Q99JW4 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lims1Q99JW4 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lims1Q99JW4 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Lims1Q99JW4 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lims1Q99JW4 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lims1Q99JW4 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Lims1Q99JW4 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lims1Q99JW4 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lims1Q99JW4 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lims1Q99JW4 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lims1Q99JW4 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lims1Q99JW4 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lims1Q99JW4 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lims1Q99JW4 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lims1Q99JW4 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lims1Q99JW4 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lims1Q99JW4 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Lims1Q99JW4 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.79□□□□□ -0.36
Lims1Q99JW4 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Lims1Q99JW4 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lims1Q99JW4 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.79□□□□□ -0.36
Lims1Q99JW4 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Lims1Q99JW4 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lims1Q99JW4 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lims1Q99JW4 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.79□□□□□ -0.36
Lims1Q99JW4 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lims1Q99JW4 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lims1Q99JW4 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.79□□□□□ -0.36
Lims1Q99JW4 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lims1Q99JW4 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC12.79□□□□□ -0.36
Lims1Q99JW4 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC12.79□□□□□ -0.36
Lims1Q99JW4 Gm12017-201ENSMUST00000122453 1003 ntBASIC12.79□□□□□ -0.36
Lims1Q99JW4 Gm43575-201ENSMUST00000196420 516 ntBASIC12.79□□□□□ -0.36
Lims1Q99JW4 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lims1Q99JW4 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12.79□□□□□ -0.36
Lims1Q99JW4 Bloc1s5-203ENSMUST00000224902 612 ntBASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms