Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk9Q99J95 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk9Q99J95 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk9Q99J95 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk9Q99J95 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.17□□□□□ -0.14
Cdk9Q99J95 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk9Q99J95 Gm12350-201ENSMUST00000121208 462 ntBASIC14.17□□□□□ -0.14
Cdk9Q99J95 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk9Q99J95 Gm25925-201ENSMUST00000158314 306 ntBASIC14.17□□□□□ -0.14
Cdk9Q99J95 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk9Q99J95 Gm6550-201ENSMUST00000187574 993 ntBASIC14.17□□□□□ -0.14
Cdk9Q99J95 Gm45167-201ENSMUST00000208007 322 ntBASIC14.17□□□□□ -0.14
Cdk9Q99J95 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk9Q99J95 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk9Q99J95 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk9Q99J95 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk9Q99J95 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Cdk9Q99J95 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk9Q99J95 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Cdk9Q99J95 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk9Q99J95 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk9Q99J95 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk9Q99J95 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cdk9Q99J95 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk9Q99J95 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk9Q99J95 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk9Q99J95 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.17□□□□□ -0.14
Cdk9Q99J95 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdk9Q99J95 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Cdk9Q99J95 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdk9Q99J95 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdk9Q99J95 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cdk9Q99J95 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdk9Q99J95 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdk9Q99J95 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdk9Q99J95 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdk9Q99J95 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdk9Q99J95 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cdk9Q99J95 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cdk9Q99J95 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cdk9Q99J95 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdk9Q99J95 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cdk9Q99J95 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.16□□□□□ -0.14
Cdk9Q99J95 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdk9Q99J95 Mir5126-201ENSMUST00000175513 77 ntBASIC14.16□□□□□ -0.14
Cdk9Q99J95 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.16□□□□□ -0.14
Cdk9Q99J95 Olfr286-202ENSMUST00000205305 969 ntBASIC14.16□□□□□ -0.14
Cdk9Q99J95 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdk9Q99J95 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdk9Q99J95 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdk9Q99J95 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdk9Q99J95 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdk9Q99J95 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdk9Q99J95 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdk9Q99J95 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.16□□□□□ -0.14
Cdk9Q99J95 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdk9Q99J95 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdk9Q99J95 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.16□□□□□ -0.14
Cdk9Q99J95 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdk9Q99J95 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdk9Q99J95 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdk9Q99J95 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdk9Q99J95 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cdk9Q99J95 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdk9Q99J95 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdk9Q99J95 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.16□□□□□ -0.14
Cdk9Q99J95 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdk9Q99J95 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cdk9Q99J95 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.15□□□□□ -0.14
Cdk9Q99J95 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdk9Q99J95 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdk9Q99J95 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdk9Q99J95 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdk9Q99J95 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Cdk9Q99J95 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cdk9Q99J95 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdk9Q99J95 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdk9Q99J95 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.15□□□□□ -0.14
Cdk9Q99J95 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdk9Q99J95 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
Cdk9Q99J95 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cdk9Q99J95 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cdk9Q99J95 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.15□□□□□ -0.14
Cdk9Q99J95 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cdk9Q99J95 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.15□□□□□ -0.14
Cdk9Q99J95 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.15□□□□□ -0.14
Cdk9Q99J95 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.15□□□□□ -0.14
Cdk9Q99J95 Gm43514-201ENSMUST00000198852 424 ntBASIC14.15□□□□□ -0.14
Cdk9Q99J95 Gm2451-201ENSMUST00000199447 999 ntBASIC14.15□□□□□ -0.14
Cdk9Q99J95 Gm10290-201ENSMUST00000200451 999 ntBASIC14.15□□□□□ -0.14
Cdk9Q99J95 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.15□□□□□ -0.14
Cdk9Q99J95 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdk9Q99J95 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdk9Q99J95 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.15□□□□□ -0.14
Cdk9Q99J95 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdk9Q99J95 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.15□□□□□ -0.14
Cdk9Q99J95 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdk9Q99J95 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Cdk9Q99J95 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdk9Q99J95 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms